Personal tools

TSS:Hg 220123.1

From referenceTSS

Revision as of 17:53, 12 March 2018 by Autoedit (talk | contribs) (Created page with "{{TSSDetail |all_trans=ENST00000372188.5:80 NM_001243779:80 uc021pux.2:80 |chr=chr10 |cpg_percent=0.04 |distance=80 |distance_to_tss=-80 |end=80407749 |entrez_id=84293 |gc_per...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_220123.1
Species:human
Chr:chr10
TSS Classification:yes
Start:80407748
End:80407749
Strand:+
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000372188.5 NM_001243779 uc021pux.2
Distance:80
GeneID:84293
HGNC/MGI_ID:HGNC:28651
UniProt_ID:Q9BRX8
Gene_name:family with sequence similarity 213 member A
Gene_symbol:FAM213A
Gene_synonyms:MGC4248 PAMM
Gene_source:HGNC:28651



Transcript annotation


Transcript_name:ENST00000372188.5 NM_001243779 uc021pux.2
Distance:80
Num_trans:3
All_trans:ENST00000372188.5:80 NM_001243779:80 uc021pux.2:80



TATA-Box annotation


Distance to TSS:-80
Nearest PromoterID:NM_001243779
Entrez ID:84293
Nearest Unigene:Hs.500333
Nearest Refseq:NM_032333
Nearest Ensembl:ENSG00000122378
Gene Name:family with sequence similarity 213 member A
Gene Alias:C10orf58
Gene Description:family with sequence similarity 213 member A
Gene Type:protein-coding
CpG%:0.04
GC%:0.512438
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-92(TTTTTTAAAGAC,+,0.00)"