Basic information about the TSS
| TSS ID: | hg_243427.1 |
|---|
| Species: | human |
|---|
| Chr: | chrM |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 1168 |
|---|
| End: | 1177 |
|---|
| Strand: | + |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | 1172 |
|---|
| End of the center position in the TSS region: | 1173 |
|---|
Gene and protein annotation
| Transcript_name: | DQ593292 |
|---|
| Distance: | 85 |
|---|
| GeneID: | 7185 |
|---|
| HGNC/MGI_ID: | HGNC:12031 |
|---|
| UniProt_ID: | |
|---|
| |
| Gene_name: | TRAF1 |
|---|
| Gene_symbol: | TRAF1 |
|---|
| Gene_synonyms: | EBI6 |
|---|
| Gene_source: | HGNC:12031 |
|---|
|
Transcript annotation
| Transcript_name: | DQ593292 |
|---|
| Distance: | 85 |
|---|
| Num_trans: | 62 |
|---|
| All_trans: | DQ593292:85 S64650:299 MS906551:-403 MS909357:-403 MP573218:-403 MS906561:-410 MS909367:-410 MS906559:-410 MS906562:-410 MS909365:-410 MS909368:-410 MP573228:-410 MP573226:-410 MP573229:-410 MS906557:-413 MS906560:-413 MS909363:-413 MS909366:-413 MP573224:-413 MP573227:-413 MS906566:-418 MS906567:-418 MS909372:-418 MS909373:-418 MP573233:-418 MP573234:-418 MS906554:-424 MS906558:-424 MS909360:-424 MS909364:-424 MP573221:-424 MP573225:-424 MS906555:-427 MS909361:-427 MP573222:-427 MS906563:-432 MS909369:-432 MP573230:-432 MS906564:-440 MS909370:-440 MP573231:-440 MS906553:-460 MS909359:-460 MP573220:-460 DQ582036:-477 MS906556:-479 MS909362:-479 MP573223:-479 AK026634:493 LF641695:494 LF641696:494 LF641697:494 LQ059297:494 LQ059298:494 LQ059299:494 MA264841:494 MA264842:494 MA264843:494 MS942517:494 MS942518:494 MS942519:494 X51525:495 |
|---|
TATA-Box annotation
| Distance to TSS: | 657 |
|---|
| Nearest PromoterID: | NM_005658 |
|---|
| Entrez ID: | 7185 |
|---|
| Nearest Unigene: | Hs.531251 |
|---|
| Nearest Refseq: | NM_005658 |
|---|
| Nearest Ensembl: | ENSG00000056558 |
|---|
| Gene Name: | TRAF1 |
|---|
| Gene Alias: | EBI6|MGC:10353 |
|---|
| Gene Description: | TNF receptor associated factor 1 |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.015 |
|---|
| GC%: | 0.597015 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
|---|
