Personal tools

TSS:Hg 100471.1

From referenceTSS

Revision as of 17:09, 8 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_100471.1
Species:human
Chr:chr9
TSS Classification:no
Start:33447586
End:33447602
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000493581.1 uc064spr.1 AK095363 AK292208 AK315760 AK303206
Distance:0
GeneID:360
HGNC/MGI_ID:HGNC:636
UniProt_ID:
Gene_name:aquaporin 3 (Gill blood group)
Gene_symbol:AQP3
Gene_synonyms:GIL
Gene_source:HGNC:636



Transcript annotation


Transcript_name:ENST00000493581.1 uc064spr.1 AK095363 AK292208 AK315760 AK303206
Distance:0
Num_trans:21
All_trans:ENST00000493581.1:0 uc064spr.1:0 AK095363:0 AK292208:0 AK315760:0 AK303206:0 ENST00000463983.5:5 uc064spt.1:5 ENST00000297991.4:-9 uc003zsx.4:-9 AB001325:14 BC013566:20 NM_004925:-31 NM_001318144:-31 AJ493597:34 KJ890695:56 CR541991:57 BT007199:57 CR542025:57 ENST00000473153.1:78 uc064spu.1:78



TATA-Box annotation


Distance to TSS:39
Nearest PromoterID:NM_004925
Entrez ID:360
Nearest Unigene:Hs.234642
Nearest Refseq:NM_004925
Nearest Ensembl:ENSG00000165272
Gene Name:aquaporin 3 (Gill blood group)
Gene Alias:AQP-3
Gene Description:aquaporin 3 (Gill blood group)
Gene Type:protein-coding
CpG%:0.115
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-34(TCCTATAAAGGG,+,0.00),-34(TCCTATAAAGGG,-,0.00)"