Personal tools

TSS:Hg 118114.1

From referenceTSS

Revision as of 12:08, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_118114.1
Species:human
Chr:chr11
TSS Classification:yes
Start:1997543
End:1997555
Strand:-
TSS Score:1
Start of the center position in the TSS region:1997549
End of the center position in the TSS region:1997550



Gene and protein annotation


Transcript_name:BC115700
Distance:41
GeneID:283120
HGNC/MGI_ID:HGNC:4713
UniProt_ID:
Gene_name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene_symbol:H19
Gene_synonyms:ASM ASM1 D11S813E LINC00008 NCRNA00008
Gene_source:HGNC:4713



Transcript annotation


Transcript_name:BC115700
Distance:41
Num_trans:37
All_trans:BC115700:41 BC053636:70 BC110657:70 ENST00000439725.5:84 uc021qca.2:84 BC002550:-101 BC015952:187 BC040852:-206 BC040073:-223 ENST00000422826.1:-242 ENST00000411754.5:-242 uc057xvs.1:-242 uc057xvv.1:-242 ENST00000412788.5:-259 uc001lva.5:-259 ENST00000431095.5:-260 uc057xvw.1:-260 ENST00000446406.5:-272 uc057xvt.1:-272 BC069247:281 AK056774:-287 AK092486:-287 AK311497:-287 AK309887:-287 BC063564:307 BC098439:309 ENST00000414790.5:-320 NR_131223:-320 NR_002196:-320 uc021qby.2:-320 ENST00000411861.5:327 uc021qbz.2:327 BC063626:327 BC023213:357 BC053637:385 BC007513:399 BC006831:439



TATA-Box annotation


Distance to TSS:326
Nearest PromoterID:NR_002196
Entrez ID:283120
Nearest Unigene:Hs.533566
Nearest Refseq:NR_002196
Nearest Ensembl:ENSG00000130600
Gene Name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene Alias:ASM
Gene Description:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene Type:ncRNA
CpG%:0.04
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):