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TSS:Hg 134547.1

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Basic information about the TSS


TSS ID:hg_134547.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27920238
End:27920279
Strand:+
TSS Score:1
Start of the center position in the TSS region:27920258
End of the center position in the TSS region:27920259



Gene and protein annotation


Transcript_name:BC111592
Distance:-102
GeneID:3651
HGNC/MGI_ID:HGNC:6107
UniProt_ID:
Gene_name:pancreatic and duodenal homeobox 1
Gene_symbol:PDX1
Gene_synonyms:IDX-1 MODY4 PDX-1 STF-1
Gene_source:HGNC:6107



Transcript annotation


Transcript_name:BC111592
Distance:-102
Num_trans:8
All_trans:BC111592:-102 AB464648:-103 U35632:-114 U30329:-120 X99894:-199 NM_000209:-208 ENST00000381033.4:-219 uc001urt.3:-219



TATA-Box annotation


Distance to TSS:228
Nearest PromoterID:NM_000209
Entrez ID:3651
Nearest Unigene:Hs.32938
Nearest Refseq:NM_000209
Nearest Ensembl:ENSG00000139515
Gene Name:pancreatic and duodenal homeobox 1
Gene Alias:GSF
Gene Description:pancreatic and duodenal homeobox 1
Gene Type:protein-coding
CpG%:0.125
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):