TSS: Hg 155906.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000563192.1:0 NR_132114:0 | |all_trans=ENST00000563192.1:0 NR_132114:0 LF210724:-1 MA446301:-1 LF340706:169 MA576283:169 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_132114 | |nearest_refseq=NR_132114 | ||
|nearest_unigene=Hs.369728 | |nearest_unigene=Hs.369728 | ||
|num_trans= | |num_trans=6 | ||
|species=human | |species=human | ||
|start=2155351 | |start=2155351 | ||
|start_of_center_position=2155354 | |start_of_center_position=2155354 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-36(TTCTATAAAAGC,-,0.00) | ||
|transcript_name=ENST00000563192.1 NR_132114 | |transcript_name=ENST00000563192.1 NR_132114 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_155906.1 | |tss_id=hg_155906.1 | ||
Revision as of 13:44, 16 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3 |
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| Nearest PromoterID: | NR_132114 |
| Entrez ID: | 100507303 |
| Nearest Unigene: | Hs.369728 |
| Nearest Refseq: | NR_132114 |
| Nearest Ensembl: | ENSG00000260260 |
| Gene Name: | small nucleolar RNA host gene 19 |
| Gene Alias: | SNORD60HG |
| Gene Description: | small nucleolar RNA host gene 19 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(TTCTATAAAAGC,-,0.00) |
TSS expression
Expression data not found.