Basic information about the TSS
| TSS ID: | hg_131287.1 |
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| Species: | human |
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| Chr: | chr12 |
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| TSS Classification: | yes |
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| Start: | 53968725 |
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| End: | 53968736 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 53968730 |
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| End of the center position in the TSS region: | 53968731 |
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Gene and protein annotation
| Transcript_name: | NR_003716.3 |
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| Distance: | -20 |
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| GeneID: | 100124700 |
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| HGNC/MGI_ID: | HGNC:33510 |
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| UniProt_ID: | |
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| Gene_name: | HOX transcript antisense RNA |
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| Gene_symbol: | HOTAIR |
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| Gene_synonyms: | HOXC-AS4 HOXC11-AS1 NCRNA00072 |
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| Gene_source: | HGNC:33510 |
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Transcript annotation
| Transcript_name: | NR_003716.3 |
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| Distance: | -20 |
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| Num_trans: | 4 |
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| All_trans: | NR_003716:-20 DQ926657:50 ENST00000439545.1:-178 NR_047518:-178 |
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TATA-Box annotation
| Distance to TSS: | 25 |
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| Nearest PromoterID: | NR_003716 |
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| Entrez ID: | 100124700 |
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| Nearest Unigene: | Hs.197076 |
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| Nearest Refseq: | NR_003716 |
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| Nearest Ensembl: | ENSG00000228630 |
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| Gene Name: | HOX transcript antisense RNA |
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| Gene Alias: | HOXAS|HOXC-AS4|HOXC11-AS1|NCRNA00072 |
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| Gene Description: | HOX transcript antisense RNA |
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| Gene Type: | ncRNA |
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| CpG%: | 0.015 |
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| GC%: | 0.512438 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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