Difference between revisions of "TSS:Hg 60513.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000511650.1:80 uc063kin.1:80 |chr=chr5 |cpg_percent=0.1 |distance=80 |distance_to_tss=56714 |end=177939542 |entrez_id=5626 |gc_percent=0.736318 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PROP-1= | ||
|all_trans=ENST00000511650.1:80 uc063kin.1:80 | |all_trans=ENST00000511650.1:80 uc063kin.1:80 | ||
|chr=chr5 | |chr=chr5 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=56714 | |distance_to_tss=56714 | ||
|end=177939542 | |end=177939542 | ||
| + | |end_of_center_position=177939528 | ||
|entrez_id=5626 | |entrez_id=5626 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=CPHD2 | + | |gene_alias=CPHD2 |
|gene_description=PROP paired-like homeobox 1 | |gene_description=PROP paired-like homeobox 1 | ||
|gene_name=PROP1 | |gene_name=PROP1 | ||
| Line 19: | Line 21: | ||
|species=human | |species=human | ||
|start=177939513 | |start=177939513 | ||
| + | |start_of_center_position=177939527 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000511650.1 uc063kin.1 | |transcript_name=ENST00000511650.1 uc063kin.1 | ||
Revision as of 14:28, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 177939527 |
|---|---|
| End of the center position in the TSS region: | 177939528 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000511650.1 uc063kin.1 |
|---|---|
| Distance: | 80 |
| Num_trans: | 2 |
| All_trans: | ENST00000511650.1:80 uc063kin.1:80 |
TATA-Box annotation
| Distance to TSS: | 56714 |
|---|---|
| Nearest PromoterID: | NM_006261 |
| Entrez ID: | 5626 |
| Nearest Unigene: | Hs.158301 |
| Nearest Refseq: | NM_006261 |
| Nearest Ensembl: | ENSG00000175325 |
| Gene Name: | PROP1 |
| Gene Alias: | CPHD2 |
| Gene Description: | PROP paired-like homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
