Difference between revisions of "TSS:Hg 155838.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000339021.4:0 uc059ovi.1:0 AK126997:0 |chr=chr16 |cpg_percent=0.115 |distance=0 |distance_to_tss=-232 |end=1309413 |entrez_id=7329 |gc_percent=0.7...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |P18= | ||
| + | |UBC9= | ||
|all_trans=ENST00000339021.4:0 uc059ovi.1:0 AK126997:0 | |all_trans=ENST00000339021.4:0 uc059ovi.1:0 AK126997:0 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-232 | |distance_to_tss=-232 | ||
|end=1309413 | |end=1309413 | ||
| + | |end_of_center_position=1309395 | ||
|entrez_id=7329 | |entrez_id=7329 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=C358B7.1 | + | |gene_alias=C358B7.1 |
|gene_description=ubiquitin conjugating enzyme E2 I | |gene_description=ubiquitin conjugating enzyme E2 I | ||
|gene_id=100130430 | |gene_id=100130430 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=1309376 | |start=1309376 | ||
| + | |start_of_center_position=1309394 | ||
|strand=- | |strand=- | ||
|tata_box="-25(CGCCCTTAAAGG,-,0.00),-24(GCCCTTAAAGGA,-,0.00),-23(CCCTTAAAGGAG,+,0.00)" | |tata_box="-25(CGCCCTTAAAGG,-,0.00),-24(GCCCTTAAAGGA,-,0.00),-23(CCCTTAAAGGAG,+,0.00)" | ||
Revision as of 15:48, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 1309394 |
|---|---|
| End of the center position in the TSS region: | 1309395 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000339021.4 uc059ovi.1 AK126997 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000339021.4:0 uc059ovi.1:0 AK126997:0 |
TATA-Box annotation
| Distance to TSS: | -232 |
|---|---|
| Nearest PromoterID: | NM_003345 |
| Entrez ID: | 7329 |
| Nearest Unigene: | Hs.302903 |
| Nearest Refseq: | NM_003345 |
| Nearest Ensembl: | ENSG00000103275 |
| Gene Name: | uncharacterized LOC100130430 |
| Gene Alias: | C358B7.1 |
| Gene Description: | ubiquitin conjugating enzyme E2 I |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-25(CGCCCTTAAAGG,-,0.00),-24(GCCCTTAAAGGA,-,0.00),-23(CCCTTAAAGGAG,+,0.00)" |
