Difference between revisions of "TSS:Hg 154762.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000429102.6:-64 uc059who.1:-64 BC014462:-64 ENST00000542274.5:200 uc059whp.1:200 AK296968:200 AK312554:202 AK225396:209 ENST00000264012.8:-221 NM_...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |HJMD= | ||
| + | |PCAD= | ||
|all_trans=ENST00000429102.6:-64 uc059who.1:-64 BC014462:-64 ENST00000542274.5:200 uc059whp.1:200 AK296968:200 AK312554:202 AK225396:209 ENST00000264012.8:-221 NM_001793:-221 NM_001317195:-221 NM_001317196:-221 uc002ewf.3:-221 BC041846:-221 X63629:226 AB527800:276 EU832319:277 EU832404:277 KJ904433:277 | |all_trans=ENST00000429102.6:-64 uc059who.1:-64 BC014462:-64 ENST00000542274.5:200 uc059whp.1:200 AK296968:200 AK312554:202 AK225396:209 ENST00000264012.8:-221 NM_001793:-221 NM_001317195:-221 NM_001317196:-221 uc002ewf.3:-221 BC041846:-221 X63629:226 AB527800:276 EU832319:277 EU832404:277 KJ904433:277 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=243 | |distance_to_tss=243 | ||
|end=68645101 | |end=68645101 | ||
| + | |end_of_center_position=68645079 | ||
|entrez_id=1001 | |entrez_id=1001 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=CDHP | + | |gene_alias=CDHP |
|gene_description=cadherin 3 | |gene_description=cadherin 3 | ||
|gene_id=1001 | |gene_id=1001 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=68645056 | |start=68645056 | ||
| + | |start_of_center_position=68645078 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000429102.6 uc059who.1 BC014462 | |transcript_name=ENST00000429102.6 uc059who.1 BC014462 | ||
Revision as of 20:34, 14 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68645078 |
|---|---|
| End of the center position in the TSS region: | 68645079 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000429102.6 uc059who.1 BC014462 |
|---|---|
| Distance: | -64 |
| Num_trans: | 19 |
| All_trans: | ENST00000429102.6:-64 uc059who.1:-64 BC014462:-64 ENST00000542274.5:200 uc059whp.1:200 AK296968:200 AK312554:202 AK225396:209 ENST00000264012.8:-221 NM_001793:-221 NM_001317195:-221 NM_001317196:-221 uc002ewf.3:-221 BC041846:-221 X63629:226 AB527800:276 EU832319:277 EU832404:277 KJ904433:277 |
TATA-Box annotation
| Distance to TSS: | 243 |
|---|---|
| Nearest PromoterID: | NM_001317196 |
| Entrez ID: | 1001 |
| Nearest Unigene: | Hs.191842 |
| Nearest Refseq: | NM_001793 |
| Nearest Ensembl: | ENSG00000062038 |
| Gene Name: | cadherin 15; cadherin 3 |
| Gene Alias: | CDHP |
| Gene Description: | cadherin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
