Difference between revisions of "TSS:Hg 158188.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr16 |cpg_percent=0.015 |distance= |distance_to_tss=53724 |end=75701463 |entrez_id=54386 |gc_percent=0.447761 |gene_alias=DRIP5|RAP1 |gene_description=TERF2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RAP1= | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=53724 | |distance_to_tss=53724 | ||
|end=75701463 | |end=75701463 | ||
| + | |end_of_center_position=75701462 | ||
|entrez_id=54386 | |entrez_id=54386 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=DRIP5 | + | |gene_alias=DRIP5 |
|gene_description=TERF2 interacting protein | |gene_description=TERF2 interacting protein | ||
|gene_name=TERF2IP | |gene_name=TERF2IP | ||
| Line 18: | Line 20: | ||
|species=human | |species=human | ||
|start=75701459 | |start=75701459 | ||
| + | |start_of_center_position=75701461 | ||
|strand=- | |strand=- | ||
|tata_box="-65(AGCTATTTAAGA,-,0.00),-34(CCCTATATAAAG,-,0.00),-32(CTATATAAAGCC,+,0.00)" | |tata_box="-65(AGCTATTTAAGA,-,0.00),-34(CCCTATATAAAG,-,0.00),-32(CTATATAAAGCC,+,0.00)" | ||
Revision as of 21:12, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 75701461 |
|---|---|
| End of the center position in the TSS region: | 75701462 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 53724 |
|---|---|
| Nearest PromoterID: | NR_144545 |
| Entrez ID: | 54386 |
| Nearest Unigene: | Hs.301419 |
| Nearest Refseq: | NM_018975 |
| Nearest Ensembl: | ENSG00000166848 |
| Gene Name: | TERF2IP |
| Gene Alias: | DRIP5 |
| Gene Description: | TERF2 interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-65(AGCTATTTAAGA,-,0.00),-34(CCCTATATAAAG,-,0.00),-32(CTATATAAAGCC,+,0.00)" |
