Difference between revisions of "TSS:Mm 10085.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000072955.11:0 NM_001310434:0 uc008idm.1:0 AK036270:0 |chr=chr2 |cpg_percent=0.01 |distance=0 |distance_to_tss=-1 |end=3114225 |entrez_id=26923...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA409679= | ||
|all_trans=ENSMUST00000072955.11:0 NM_001310434:0 uc008idm.1:0 AK036270:0 | |all_trans=ENSMUST00000072955.11:0 NM_001310434:0 uc008idm.1:0 AK036270:0 | ||
|chr=chr2 | |chr=chr2 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
|end=3114225 | |end=3114225 | ||
| + | |end_of_center_position=3114223 | ||
|entrez_id=269233 | |entrez_id=269233 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=9630050M13Rik | + | |gene_alias=9630050M13Rik |
|gene_description="family with sequence similarity 171, member A1" | |gene_description="family with sequence similarity 171, member A1" | ||
|gene_id=269233 | |gene_id=269233 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=3114220 | |start=3114220 | ||
| + | |start_of_center_position=3114222 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000072955.11 NM_001310434 uc008idm.1 AK036270 | |transcript_name=ENSMUST00000072955.11 NM_001310434 uc008idm.1 AK036270 | ||
Revision as of 00:32, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3114222 |
|---|---|
| End of the center position in the TSS region: | 3114223 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000072955.11 NM_001310434 uc008idm.1 AK036270 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000072955.11:0 NM_001310434:0 uc008idm.1:0 AK036270:0 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001310434 |
| Entrez ID: | 269233 |
| Nearest Unigene: | Mm.23044 |
| Nearest Refseq: | NM_001081161 |
| Nearest Ensembl: | ENSMUSG00000050530 |
| Gene Name: | "family with sequence similarity 171, member A1" |
| Gene Alias: | 9630050M13Rik |
| Gene Description: | "family with sequence similarity 171, member A1" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
