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Difference between revisions of "TSS:Mm 10096.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000100463.9:0 ENSMUST00000061852.11:0 ENSMUST00000132565.7:0 ENSMUST00000102988.9:0 ENSMUST00000146027.7:0 ENSMUST00000115066.7:0 ENSMUST000001...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|AI661365=
 +
|Art=
 +
|Snm1l=
 
|all_trans=ENSMUST00000100463.9:0 ENSMUST00000061852.11:0 ENSMUST00000132565.7:0 ENSMUST00000102988.9:0 ENSMUST00000146027.7:0 ENSMUST00000115066.7:0 ENSMUST00000131433.1:0 NM_001110214:0 NM_001302684:0 NM_146114:0 NM_175683:0 NM_001302674:0 uc008idy.2:0 uc056zjb.1:0 uc008idz.2:0 uc012bos.2:0 uc008iea.3:0 uc008ieb.3:0 AF387731:0 AK037126:0 AK088810:0 AK052369:0 BC108935:0 AK166324:0 AK052490:0 AK038788:0
 
|all_trans=ENSMUST00000100463.9:0 ENSMUST00000061852.11:0 ENSMUST00000132565.7:0 ENSMUST00000102988.9:0 ENSMUST00000146027.7:0 ENSMUST00000115066.7:0 ENSMUST00000131433.1:0 NM_001110214:0 NM_001302684:0 NM_146114:0 NM_175683:0 NM_001302674:0 uc008idy.2:0 uc056zjb.1:0 uc008idz.2:0 uc012bos.2:0 uc008iea.3:0 uc008ieb.3:0 AF387731:0 AK037126:0 AK088810:0 AK052369:0 BC108935:0 AK166324:0 AK052490:0 AK038788:0
 
|chr=chr2
 
|chr=chr2
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|distance_to_tss=34
 
|distance_to_tss=34
 
|end=3424207
 
|end=3424207
 +
|end_of_center_position=3424166
 
|entrez_id=227525
 
|entrez_id=227525
 
|gc_percent=0.606965
 
|gc_percent=0.606965
−
|gene_alias=9930121L06Rik|AI661365|Art|Snm1l
+
|gene_alias=9930121L06Rik
 
|gene_description=DNA cross-link repair 1C
 
|gene_description=DNA cross-link repair 1C
 
|gene_id=227525
 
|gene_id=227525
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|species=mouse
 
|species=mouse
 
|start=3424123
 
|start=3424123
 +
|start_of_center_position=3424165
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000100463.9 ENSMUST00000061852.11 ENSMUST00000132565.7 ENSMUST00000102988.9 ENSMUST00000146027.7 ENSMUST00000115066.7 ENSMUST00000131433.1 NM_001110214 NM_001302684 NM_146114 NM_175683 NM_001302674 uc008idy.2 uc056zjb.1 uc008idz.2 uc012bos.2 uc008iea.3 uc008ieb.3 AF387731 AK037126 AK088810 AK052369 BC108935 AK166324 AK052490 AK038788
 
|transcript_name=ENSMUST00000100463.9 ENSMUST00000061852.11 ENSMUST00000132565.7 ENSMUST00000102988.9 ENSMUST00000146027.7 ENSMUST00000115066.7 ENSMUST00000131433.1 NM_001110214 NM_001302684 NM_146114 NM_175683 NM_001302674 uc008idy.2 uc056zjb.1 uc008idz.2 uc012bos.2 uc008iea.3 uc008ieb.3 AF387731 AK037126 AK088810 AK052369 BC108935 AK166324 AK052490 AK038788

Revision as of 00:33, 15 May 2019

Basic information about the TSS

TSS ID:mm_10096.1
Species:mouse
Chr:chr2
TSS Classification:no
Start:3424123
End:3424207
Strand:+
TSS Score:1
Start of the center position in the TSS region:3424165
End of the center position in the TSS region:3424166



Gene and protein annotation

Transcript_name:ENSMUST00000100463.9 ENSMUST00000061852.11 ENSMUST00000132565.7 ENSMUST00000102988.9 ENSMUST00000146027.7 ENSMUST00000115066.7 ENSMUST00000131433.1 NM_001110214 NM_001302684 NM_146114 NM_175683 NM_001302674 uc008idy.2 uc056zjb.1 uc008idz.2 uc012bos.2 uc008iea.3 uc008ieb.3 AF387731 AK037126 AK088810 AK052369 BC108935 AK166324 AK052490 AK038788
Distance:0
GeneID:227525
HGNC/MGI_ID:MGI:2441769
UniProt_ID:Q32MX8 Q3TLT6 Q8K4J0 Q8K4J0-2 Q8K4J0-3
Gene_name:DNA cross-link repair 1C
Gene_symbol:Dclre1c
Gene_synonyms:9930121L06Rik Art Artemis
Gene_source:MGI:2441769



Transcript annotation

Transcript_name:ENSMUST00000100463.9 ENSMUST00000061852.11 ENSMUST00000132565.7 ENSMUST00000102988.9 ENSMUST00000146027.7 ENSMUST00000115066.7 ENSMUST00000131433.1 NM_001110214 NM_001302684 NM_146114 NM_175683 NM_001302674 uc008idy.2 uc056zjb.1 uc008idz.2 uc012bos.2 uc008iea.3 uc008ieb.3 AF387731 AK037126 AK088810 AK052369 BC108935 AK166324 AK052490 AK038788
Distance:0
Num_trans:26
All_trans:ENSMUST00000100463.9:0 ENSMUST00000061852.11:0 ENSMUST00000132565.7:0 ENSMUST00000102988.9:0 ENSMUST00000146027.7:0 ENSMUST00000115066.7:0 ENSMUST00000131433.1:0 NM_001110214:0 NM_001302684:0 NM_146114:0 NM_175683:0 NM_001302674:0 uc008idy.2:0 uc056zjb.1:0 uc008idz.2:0 uc012bos.2:0 uc008iea.3:0 uc008ieb.3:0 AF387731:0 AK037126:0 AK088810:0 AK052369:0 BC108935:0 AK166324:0 AK052490:0 AK038788:0



TATA-Box annotation

Distance to TSS:34
Nearest PromoterID:NM_001302684
Entrez ID:227525
Nearest Unigene:Mm.23483
Nearest Refseq:NM_146114
Nearest Ensembl:ENSMUSG00000026648
Gene Name:DNA cross-link repair 1C
Gene Alias:9930121L06Rik
Gene Description:DNA cross-link repair 1C
Gene Type:protein-coding
CpG%:0.05
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
Retrieved from "http://reftss.riken.jp/reftss-v3/index.php?title=TSS:Mm_10096.1&oldid=1034714"