Difference between revisions of "TSS:Mm 10105.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Armetl1= | ||
|all_trans=BC110560:-16 ENSMUST00000036350.2:-28 NM_177647:-28 uc008iej.1:-28 AK034009:-28 ENSMUST00000140610.7:-63 | |all_trans=BC110560:-16 ENSMUST00000036350.2:-28 NM_177647:-28 uc008iej.1:-28 AK034009:-28 ENSMUST00000140610.7:-63 | ||
|chr=chr2 | |chr=chr2 | ||
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|distance_to_tss=45 | |distance_to_tss=45 | ||
|end=3513127 | |end=3513127 | ||
| + | |end_of_center_position=3513110 | ||
|entrez_id=227526 | |entrez_id=227526 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=9330140G23 | + | |gene_alias=9330140G23 |
|gene_description=cerebral dopamine neurotrophic factor | |gene_description=cerebral dopamine neurotrophic factor | ||
|gene_id=227526 | |gene_id=227526 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=3513092 | |start=3513092 | ||
| + | |start_of_center_position=3513109 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC110560 | |transcript_name=BC110560 | ||
Revision as of 00:34, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3513109 |
|---|---|
| End of the center position in the TSS region: | 3513110 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC110560 |
|---|---|
| Distance: | -16 |
| Num_trans: | 6 |
| All_trans: | BC110560:-16 ENSMUST00000036350.2:-28 NM_177647:-28 uc008iej.1:-28 AK034009:-28 ENSMUST00000140610.7:-63 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_177647 |
| Entrez ID: | 227526 |
| Nearest Unigene: | Mm.211455 |
| Nearest Refseq: | NM_177647 |
| Nearest Ensembl: | ENSMUSG00000039496 |
| Gene Name: | cerebral dopamine neurotrophic factor |
| Gene Alias: | 9330140G23 |
| Gene Description: | cerebral dopamine neurotrophic factor |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
