Difference between revisions of "TSS:Mm 10111.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000027965.10:15 NM_025626:15 uc008iek.1:15 AK032875:15 ENSMUST00000115053.8:35 ENSMUST00000177125.1:35 AK013932:50 AK168759:50 BC021353:60 AK01...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA589595= | ||
| + | |AA959793= | ||
| + | |AI132312= | ||
|all_trans=ENSMUST00000027965.10:15 NM_025626:15 uc008iek.1:15 AK032875:15 ENSMUST00000115053.8:35 ENSMUST00000177125.1:35 AK013932:50 AK168759:50 BC021353:60 AK019815:103 | |all_trans=ENSMUST00000027965.10:15 NM_025626:15 uc008iek.1:15 AK032875:15 ENSMUST00000115053.8:35 ENSMUST00000177125.1:35 AK013932:50 AK168759:50 BC021353:60 AK019815:103 | ||
|chr=chr2 | |chr=chr2 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=3713443 | |end=3713443 | ||
| + | |end_of_center_position=3713442 | ||
|entrez_id=66540 | |entrez_id=66540 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=3110001A13Rik | + | |gene_alias=3110001A13Rik |
|gene_description="family with sequence similarity 107, member B" | |gene_description="family with sequence similarity 107, member B" | ||
|gene_id=66540 | |gene_id=66540 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=3713440 | |start=3713440 | ||
| + | |start_of_center_position=3713441 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000027965.10 NM_025626 uc008iek.1 AK032875 | |transcript_name=ENSMUST00000027965.10 NM_025626 uc008iek.1 AK032875 | ||
Revision as of 00:35, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3713441 |
|---|---|
| End of the center position in the TSS region: | 3713442 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000027965.10 NM_025626 uc008iek.1 AK032875 |
|---|---|
| Distance: | 15 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000027965.10:15 NM_025626:15 uc008iek.1:15 AK032875:15 ENSMUST00000115053.8:35 ENSMUST00000177125.1:35 AK013932:50 AK168759:50 BC021353:60 AK019815:103 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_025626 |
| Entrez ID: | 66540 |
| Nearest Unigene: | Mm.277864 |
| Nearest Refseq: | NM_025626 |
| Nearest Ensembl: | ENSMUSG00000026655 |
| Gene Name: | "family with sequence similarity 107, member B" |
| Gene Alias: | 3110001A13Rik |
| Gene Description: | "family with sequence similarity 107, member B" |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
