Difference between revisions of "TSS:Mm 10114.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC021353:-15 AK019815:18 AK013932:-25 AK168759:-25 ENSMUST00000115053.8:-40 ENSMUST00000177125.1:-40 ENSMUST00000027965.10:-60 NM_025626:-60 uc008iek.1:...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA589595= | ||
| + | |AA959793= | ||
| + | |AI132312= | ||
|all_trans=BC021353:-15 AK019815:18 AK013932:-25 AK168759:-25 ENSMUST00000115053.8:-40 ENSMUST00000177125.1:-40 ENSMUST00000027965.10:-60 NM_025626:-60 uc008iek.1:-60 AK032875:-60 | |all_trans=BC021353:-15 AK019815:18 AK013932:-25 AK168759:-25 ENSMUST00000115053.8:-40 ENSMUST00000177125.1:-40 ENSMUST00000027965.10:-60 NM_025626:-60 uc008iek.1:-60 AK032875:-60 | ||
|chr=chr2 | |chr=chr2 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=65 | |distance_to_tss=65 | ||
|end=3713528 | |end=3713528 | ||
| + | |end_of_center_position=3713523 | ||
|entrez_id=66540 | |entrez_id=66540 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=3110001A13Rik | + | |gene_alias=3110001A13Rik |
|gene_description="family with sequence similarity 107, member B" | |gene_description="family with sequence similarity 107, member B" | ||
|gene_id=66540 | |gene_id=66540 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=3713517 | |start=3713517 | ||
| + | |start_of_center_position=3713522 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC021353 | |transcript_name=BC021353 | ||
Revision as of 00:35, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3713522 |
|---|---|
| End of the center position in the TSS region: | 3713523 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC021353 |
|---|---|
| Distance: | -15 |
| Num_trans: | 10 |
| All_trans: | BC021353:-15 AK019815:18 AK013932:-25 AK168759:-25 ENSMUST00000115053.8:-40 ENSMUST00000177125.1:-40 ENSMUST00000027965.10:-60 NM_025626:-60 uc008iek.1:-60 AK032875:-60 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NM_025626 |
| Entrez ID: | 66540 |
| Nearest Unigene: | Mm.277864 |
| Nearest Refseq: | NM_025626 |
| Nearest Ensembl: | ENSMUSG00000026655 |
| Gene Name: | "family with sequence similarity 107, member B" |
| Gene Alias: | 3110001A13Rik |
| Gene Description: | "family with sequence similarity 107, member B" |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
