Difference between revisions of "TSS:Mm 10167.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr2 |cpg_percent=0.015 |distance= |distance_to_tss=30996 |end=4431997 |entrez_id=209630 |gc_percent=0.427861 |gene_alias=2700017I06Rik|5330420J21|AI594879|C2...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |5330420J21= | ||
| + | |AI594879= | ||
| + | |C230040M21Rik= | ||
| + | |Frmd4= | ||
| + | |Gm13190= | ||
| + | |OTTMUSG00000010806= | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 5: | Line 11: | ||
|distance_to_tss=30996 | |distance_to_tss=30996 | ||
|end=4431997 | |end=4431997 | ||
| + | |end_of_center_position=4431972 | ||
|entrez_id=209630 | |entrez_id=209630 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=2700017I06Rik | + | |gene_alias=2700017I06Rik |
|gene_description=FERM domain containing 4A | |gene_description=FERM domain containing 4A | ||
|gene_name=Frmd4a | |gene_name=Frmd4a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA1294= | ||
|nearest_ensembl=ENSMUSG00000026657 | |nearest_ensembl=ENSMUSG00000026657 | ||
|nearest_promoter_id=NM_001177843 | |nearest_promoter_id=NM_001177843 | ||
| Line 18: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=4431946 | |start=4431946 | ||
| + | |start_of_center_position=4431971 | ||
|strand=+ | |strand=+ | ||
|tata_box="35(CCTTTTATGACA,+,0.00)" | |tata_box="35(CCTTTTATGACA,+,0.00)" | ||
Revision as of 00:39, 15 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 4431971 |
|---|---|
| End of the center position in the TSS region: | 4431972 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 30996 |
|---|---|
| Nearest PromoterID: | NM_001177843 |
| Entrez ID: | 209630 |
| Nearest Unigene: | Mm.37932 |
| Nearest Refseq: | NM_172475 |
| Nearest Ensembl: | ENSMUSG00000026657 |
| Gene Name: | Frmd4a |
| Gene Alias: | 2700017I06Rik |
| Gene Description: | FERM domain containing 4A |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "35(CCTTTTATGACA,+,0.00)" |
