Difference between revisions of "TSS:Hg 161565.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_138281:0 BC016145:0 AF254115:0 ENST00000240306.4:-6 uc002ipv.4:-6 ENST00000505318.2:119 uc060hdz.1:119 ENST00000503410.1:-210 uc060hdy.1:-210 AB52746...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DLX7= | ||
| + | |DLX8= | ||
| + | |DLX9= | ||
| + | |OFC15= | ||
|all_trans=NM_138281:0 BC016145:0 AF254115:0 ENST00000240306.4:-6 uc002ipv.4:-6 ENST00000505318.2:119 uc060hdz.1:119 ENST00000503410.1:-210 uc060hdy.1:-210 AB527463:258 BT006978:258 KJ891055:258 | |all_trans=NM_138281:0 BC016145:0 AF254115:0 ENST00000240306.4:-6 uc002ipv.4:-6 ENST00000505318.2:119 uc060hdz.1:119 ENST00000503410.1:-210 uc060hdy.1:-210 AB527463:258 BT006978:258 KJ891055:258 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=49969211 | |end=49969211 | ||
| + | |end_of_center_position=49969196 | ||
|entrez_id=1748 | |entrez_id=1748 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=BP1 | + | |gene_alias=BP1 |
|gene_description=distal-less homeobox 4 | |gene_description=distal-less homeobox 4 | ||
|gene_id=1748 | |gene_id=1748 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=49969179 | |start=49969179 | ||
| + | |start_of_center_position=49969195 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_138281 BC016145 AF254115 | |transcript_name=NM_138281 BC016145 AF254115 | ||
Revision as of 04:28, 15 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 49969195 |
|---|---|
| End of the center position in the TSS region: | 49969196 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_138281 BC016145 AF254115 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | NM_138281:0 BC016145:0 AF254115:0 ENST00000240306.4:-6 uc002ipv.4:-6 ENST00000505318.2:119 uc060hdz.1:119 ENST00000503410.1:-210 uc060hdy.1:-210 AB527463:258 BT006978:258 KJ891055:258 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_138281 |
| Entrez ID: | 1748 |
| Nearest Unigene: | Hs.591167 |
| Nearest Refseq: | NM_001934 |
| Nearest Ensembl: | ENSG00000108813 |
| Gene Name: | distal-less homeobox 4 |
| Gene Alias: | BP1 |
| Gene Description: | distal-less homeobox 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
