Difference between revisions of "TSS:Hg 167046.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CARPX= | ||
| + | |HUCEP-15= | ||
|all_trans=AL161812:16 JF432658:17 KJ894363:17 AB001597:18 AB529209:18 ENST00000571371.5:-243 ENST00000573294.1:-243 uc060hpl.1:-243 uc060hpr.1:-243 CR749607:-243 AY358509:-246 | |all_trans=AL161812:16 JF432658:17 KJ894363:17 AB001597:18 AB529209:18 ENST00000571371.5:-243 ENST00000573294.1:-243 uc060hpl.1:-243 uc060hpr.1:-243 CR749607:-243 AY358509:-246 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=960 | |distance_to_tss=960 | ||
|end=52157820 | |end=52157820 | ||
| + | |end_of_center_position=52157812 | ||
|entrez_id=56934 | |entrez_id=56934 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=CA-RPX | + | |gene_alias=CA-RPX |
|gene_description=carbonic anhydrase 10 | |gene_description=carbonic anhydrase 10 | ||
|gene_id=56934 | |gene_id=56934 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=52157803 | |start=52157803 | ||
| + | |start_of_center_position=52157811 | ||
|strand=- | |strand=- | ||
|transcript_name=AL161812 | |transcript_name=AL161812 | ||
Revision as of 04:54, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 52157811 |
|---|---|
| End of the center position in the TSS region: | 52157812 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AL161812 |
|---|---|
| Distance: | 16 |
| Num_trans: | 11 |
| All_trans: | AL161812:16 JF432658:17 KJ894363:17 AB001597:18 AB529209:18 ENST00000571371.5:-243 ENST00000573294.1:-243 uc060hpl.1:-243 uc060hpr.1:-243 CR749607:-243 AY358509:-246 |
TATA-Box annotation
| Distance to TSS: | 960 |
|---|---|
| Nearest PromoterID: | NM_020178 |
| Entrez ID: | 56934 |
| Nearest Unigene: | Hs.463466 |
| Nearest Refseq: | NM_020178 |
| Nearest Ensembl: | ENSG00000154975 |
| Gene Name: | carbonic anhydrase 10 |
| Gene Alias: | CA-RPX |
| Gene Description: | carbonic anhydrase 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
