Difference between revisions of "TSS:Hg 167049.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC047456:-146 AK313001:173 ENST00000451037.6:-188 uc002itw.5:-188 BC068462:-188 AK294652:191 CR936674:-226 NM_020178:-233 AY358509:454 ENST00000571371.5...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CARPX= | ||
| + | |HUCEP-15= | ||
|all_trans=BC047456:-146 AK313001:173 ENST00000451037.6:-188 uc002itw.5:-188 BC068462:-188 AK294652:191 CR936674:-226 NM_020178:-233 AY358509:454 ENST00000571371.5:457 ENST00000573294.1:457 uc060hpl.1:457 uc060hpr.1:457 CR749607:457 | |all_trans=BC047456:-146 AK313001:173 ENST00000451037.6:-188 uc002itw.5:-188 BC068462:-188 AK294652:191 CR936674:-226 NM_020178:-233 AY358509:454 ENST00000571371.5:457 ENST00000573294.1:457 uc060hpl.1:457 uc060hpr.1:457 CR749607:457 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=243 | |distance_to_tss=243 | ||
|end=52158539 | |end=52158539 | ||
| + | |end_of_center_position=52158530 | ||
|entrez_id=56934 | |entrez_id=56934 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=CA-RPX | + | |gene_alias=CA-RPX |
|gene_description=carbonic anhydrase 10 | |gene_description=carbonic anhydrase 10 | ||
|gene_id=56934 | |gene_id=56934 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=52158519 | |start=52158519 | ||
| + | |start_of_center_position=52158529 | ||
|strand=- | |strand=- | ||
|transcript_name=BC047456 | |transcript_name=BC047456 | ||
Revision as of 04:54, 15 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 52158529 |
|---|---|
| End of the center position in the TSS region: | 52158530 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC047456 |
|---|---|
| Distance: | -146 |
| Num_trans: | 14 |
| All_trans: | BC047456:-146 AK313001:173 ENST00000451037.6:-188 uc002itw.5:-188 BC068462:-188 AK294652:191 CR936674:-226 NM_020178:-233 AY358509:454 ENST00000571371.5:457 ENST00000573294.1:457 uc060hpl.1:457 uc060hpr.1:457 CR749607:457 |
TATA-Box annotation
| Distance to TSS: | 243 |
|---|---|
| Nearest PromoterID: | NM_020178 |
| Entrez ID: | 56934 |
| Nearest Unigene: | Hs.463466 |
| Nearest Refseq: | NM_020178 |
| Nearest Ensembl: | ENSG00000154975 |
| Gene Name: | carbonic anhydrase 10 |
| Gene Alias: | CA-RPX |
| Gene Description: | carbonic anhydrase 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
