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Difference between revisions of "TSS:Hg 78446.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000481437.5:0 ENST00000451562.5:0 ENST00000468812.5:0 ENST00000489459.5:0 ENST00000355968.10:0 ENST00000620047.4:0 ENST00000479021.1:0 ENST0000041...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|CYPH=
 +
|HEL-S-69p=
 
|all_trans=ENST00000481437.5:0 ENST00000451562.5:0 ENST00000468812.5:0 ENST00000489459.5:0 ENST00000355968.10:0 ENST00000620047.4:0 ENST00000479021.1:0 ENST00000415933.5:0 uc064djm.1:0 uc064djn.1:0 uc003tlw.4:0 uc064djo.1:0 uc064djp.1:0 uc064djq.1:0 uc064djr.1:0 uc064djs.1:0 BC005982:0 AK290851:0 BC007104:0 BC013915:0 AK293003:0 AK130101:0 AK316564:0 AK026569:0 BC093076:0 AK297340:0 D28351:0 BC005320:0 BC018843:0 AK290085:0 BC106030:5 EU794650:5 BC073992:7 BC069050:11 BC003026:13 BC000689:19 Y00052:27 AB464007:38 DQ895865:39 DQ892625:39 CU674338:40 KJ891858:40 KJ905864:40 KJ897362:40 AB451438:41 AB451307:41 CR456707:41 NM_001300981:-42 NM_021130:-42 BC137057:-42 BC137058:-42
 
|all_trans=ENST00000481437.5:0 ENST00000451562.5:0 ENST00000468812.5:0 ENST00000489459.5:0 ENST00000355968.10:0 ENST00000620047.4:0 ENST00000479021.1:0 ENST00000415933.5:0 uc064djm.1:0 uc064djn.1:0 uc003tlw.4:0 uc064djo.1:0 uc064djp.1:0 uc064djq.1:0 uc064djr.1:0 uc064djs.1:0 BC005982:0 AK290851:0 BC007104:0 BC013915:0 AK293003:0 AK130101:0 AK316564:0 AK026569:0 BC093076:0 AK297340:0 D28351:0 BC005320:0 BC018843:0 AK290085:0 BC106030:5 EU794650:5 BC073992:7 BC069050:11 BC003026:13 BC000689:19 Y00052:27 AB464007:38 DQ895865:39 DQ892625:39 CU674338:40 KJ891858:40 KJ905864:40 KJ897362:40 AB451438:41 AB451307:41 CR456707:41 NM_001300981:-42 NM_021130:-42 BC137057:-42 BC137058:-42
 
|chr=chr7
 
|chr=chr7
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|distance_to_tss=45
 
|distance_to_tss=45
 
|end=44796684
 
|end=44796684
 +
|end_of_center_position=44796681
 
|entrez_id=5478
 
|entrez_id=5478
 
|gc_percent=0.661692
 
|gc_percent=0.661692
−
|gene_alias=CYPA|CYPH|HEL-S-69p
+
|gene_alias=CYPA
 
|gene_description=peptidylprolyl isomerase A
 
|gene_description=peptidylprolyl isomerase A
 
|gene_id=5478
 
|gene_id=5478
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|species=human
 
|species=human
 
|start=44796677
 
|start=44796677
 +
|start_of_center_position=44796680
 
|strand=+
 
|strand=+
 
|tata_box="-34(TGGTATAAAAGG,-,0.00)"
 
|tata_box="-34(TGGTATAAAAGG,-,0.00)"

Revision as of 05:10, 15 May 2019

Basic information about the TSS

TSS ID:hg_78446.1
Species:human
Chr:chr7
TSS Classification:yes
Start:44796677
End:44796684
Strand:+
TSS Score:1
Start of the center position in the TSS region:44796680
End of the center position in the TSS region:44796681



Gene and protein annotation

Transcript_name:ENST00000481437.5 ENST00000451562.5 ENST00000468812.5 ENST00000489459.5 ENST00000355968.10 ENST00000620047.4 ENST00000479021.1 ENST00000415933.5 uc064djm.1 uc064djn.1 uc003tlw.4 uc064djo.1 uc064djp.1 uc064djq.1 uc064djr.1 uc064djs.1 BC005982 AK290851 BC007104 BC013915 AK293003 AK130101 AK316564 AK026569 BC093076 AK297340 D28351 BC005320 BC018843 AK290085
Distance:0
GeneID:5478
HGNC/MGI_ID:HGNC:9253
UniProt_ID:A8K486 B2RE56 B4DM82 C9J5S7 E5RIZ5 F8WE65 P62937 V9HWF5
Gene_name:peptidylprolyl isomerase A
Gene_symbol:PPIA
Gene_synonyms:CYPA
Gene_source:HGNC:9253



Transcript annotation

Transcript_name:ENST00000481437.5 ENST00000451562.5 ENST00000468812.5 ENST00000489459.5 ENST00000355968.10 ENST00000620047.4 ENST00000479021.1 ENST00000415933.5 uc064djm.1 uc064djn.1 uc003tlw.4 uc064djo.1 uc064djp.1 uc064djq.1 uc064djr.1 uc064djs.1 BC005982 AK290851 BC007104 BC013915 AK293003 AK130101 AK316564 AK026569 BC093076 AK297340 D28351 BC005320 BC018843 AK290085
Distance:0
Num_trans:51
All_trans:ENST00000481437.5:0 ENST00000451562.5:0 ENST00000468812.5:0 ENST00000489459.5:0 ENST00000355968.10:0 ENST00000620047.4:0 ENST00000479021.1:0 ENST00000415933.5:0 uc064djm.1:0 uc064djn.1:0 uc003tlw.4:0 uc064djo.1:0 uc064djp.1:0 uc064djq.1:0 uc064djr.1:0 uc064djs.1:0 BC005982:0 AK290851:0 BC007104:0 BC013915:0 AK293003:0 AK130101:0 AK316564:0 AK026569:0 BC093076:0 AK297340:0 D28351:0 BC005320:0 BC018843:0 AK290085:0 BC106030:5 EU794650:5 BC073992:7 BC069050:11 BC003026:13 BC000689:19 Y00052:27 AB464007:38 DQ895865:39 DQ892625:39 CU674338:40 KJ891858:40 KJ905864:40 KJ897362:40 AB451438:41 AB451307:41 CR456707:41 NM_001300981:-42 NM_021130:-42 BC137057:-42 BC137058:-42



TATA-Box annotation

Distance to TSS:45
Nearest PromoterID:NM_001300981
Entrez ID:5478
Nearest Unigene:Hs.356331
Nearest Refseq:NM_021130
Nearest Ensembl:ENSG00000196262
Gene Name:peptidylprolyl isomerase A
Gene Alias:CYPA
Gene Description:peptidylprolyl isomerase A
Gene Type:protein-coding
CpG%:0.13
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-34(TGGTATAAAAGG,-,0.00)"
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