Difference between revisions of "TSS:Hg 162326.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_000727:70 ENST00000226021.4:124 uc002jfu.4:124 L07738:124 AK313852:133 BC113492:135 BC113486:135 BC069493:147 HQ258641:191 KJ890809:191 KJ896532:191...") |
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|distance_to_tss=-72 | |distance_to_tss=-72 | ||
|end=67044466 | |end=67044466 | ||
| + | |end_of_center_position=67044464 | ||
|entrez_id=786 | |entrez_id=786 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=67044461 | |start=67044461 | ||
| + | |start_of_center_position=67044463 | ||
|strand=+ | |strand=+ | ||
|tata_box="-32(GCATTAATAGCA,+,0.00)" | |tata_box="-32(GCATTAATAGCA,+,0.00)" | ||
Revision as of 06:10, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 67044463 |
|---|---|
| End of the center position in the TSS region: | 67044464 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_000727 |
|---|---|
| Distance: | 70 |
| Num_trans: | 11 |
| All_trans: | NM_000727:70 ENST00000226021.4:124 uc002jfu.4:124 L07738:124 AK313852:133 BC113492:135 BC113486:135 BC069493:147 HQ258641:191 KJ890809:191 KJ896532:191 |
TATA-Box annotation
| Distance to TSS: | -72 |
|---|---|
| Nearest PromoterID: | NM_000727 |
| Entrez ID: | 786 |
| Nearest Unigene: | Hs.147989 |
| Nearest Refseq: | NM_000727 |
| Nearest Ensembl: | ENSG00000108878 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Alias: | CACNLG |
| Gene Description: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(GCATTAATAGCA,+,0.00)" |
