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Difference between revisions of "TSS:Hg 162329.1"

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(Created page with "{{TSSDetail |all_trans=BC069493:-9 BC113492:-21 BC113486:-21 AK313852:-23 HQ258641:27 KJ890809:27 KJ896532:27 ENST00000226021.4:-32 uc002jfu.4:-32 L07738:-32 NM_000727:-86 |ch...")
 
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|distance_to_tss=90
 
|distance_to_tss=90
 
|end=67044630
 
|end=67044630
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|end_of_center_position=67044626
 
|entrez_id=786
 
|entrez_id=786
 
|gc_percent=0.641791
 
|gc_percent=0.641791
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|species=human
 
|species=human
 
|start=67044621
 
|start=67044621
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|start_of_center_position=67044625
 
|strand=+
 
|strand=+
 
|transcript_name=BC069493
 
|transcript_name=BC069493

Revision as of 06:10, 15 May 2019

Basic information about the TSS


TSS ID:hg_162329.1
Species:human
Chr:chr17
TSS Classification:yes
Start:67044621
End:67044630
Strand:+
TSS Score:1
Start of the center position in the TSS region:67044625
End of the center position in the TSS region:67044626



Gene and protein annotation


Transcript_name:BC069493
Distance:-9
GeneID:786
HGNC/MGI_ID:HGNC:1405
UniProt_ID:
Gene_name:calcium voltage-gated channel auxiliary subunit gamma 1
Gene_symbol:CACNG1
Gene_synonyms:
Gene_source:HGNC:1405



Transcript annotation


Transcript_name:BC069493
Distance:-9
Num_trans:11
All_trans:BC069493:-9 BC113492:-21 BC113486:-21 AK313852:-23 HQ258641:27 KJ890809:27 KJ896532:27 ENST00000226021.4:-32 uc002jfu.4:-32 L07738:-32 NM_000727:-86



TATA-Box annotation


Distance to TSS:90
Nearest PromoterID:NM_000727
Entrez ID:786
Nearest Unigene:Hs.147989
Nearest Refseq:NM_000727
Nearest Ensembl:ENSG00000108878
Gene Name:calcium voltage-gated channel auxiliary subunit gamma 1
Gene Alias:CACNLG
Gene Description:calcium voltage-gated channel auxiliary subunit gamma 1
Gene Type:protein-coding
CpG%:0.055
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):