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Difference between revisions of "TSS:Hg 162330.1"

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(Created page with "{{TSSDetail |all_trans=BC069493:-20 HQ258641:20 KJ890809:20 KJ896532:20 BC113492:-32 BC113486:-32 AK313852:-34 ENST00000226021.4:-43 uc002jfu.4:-43 L07738:-43 NM_000727:-97 |c...")
 
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|distance_to_tss=99
 
|distance_to_tss=99
 
|end=67044637
 
|end=67044637
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|end_of_center_position=67044635
 
|entrez_id=786
 
|entrez_id=786
 
|gc_percent=0.636816
 
|gc_percent=0.636816
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|species=human
 
|species=human
 
|start=67044632
 
|start=67044632
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|start_of_center_position=67044634
 
|strand=+
 
|strand=+
 
|transcript_name=BC069493
 
|transcript_name=BC069493

Revision as of 06:10, 15 May 2019

Basic information about the TSS


TSS ID:hg_162330.1
Species:human
Chr:chr17
TSS Classification:yes
Start:67044632
End:67044637
Strand:+
TSS Score:1
Start of the center position in the TSS region:67044634
End of the center position in the TSS region:67044635



Gene and protein annotation


Transcript_name:BC069493
Distance:-20
GeneID:786
HGNC/MGI_ID:HGNC:1405
UniProt_ID:
Gene_name:calcium voltage-gated channel auxiliary subunit gamma 1
Gene_symbol:CACNG1
Gene_synonyms:
Gene_source:HGNC:1405



Transcript annotation


Transcript_name:BC069493
Distance:-20
Num_trans:11
All_trans:BC069493:-20 HQ258641:20 KJ890809:20 KJ896532:20 BC113492:-32 BC113486:-32 AK313852:-34 ENST00000226021.4:-43 uc002jfu.4:-43 L07738:-43 NM_000727:-97



TATA-Box annotation


Distance to TSS:99
Nearest PromoterID:NM_000727
Entrez ID:786
Nearest Unigene:Hs.147989
Nearest Refseq:NM_000727
Nearest Ensembl:ENSG00000108878
Gene Name:calcium voltage-gated channel auxiliary subunit gamma 1
Gene Alias:CACNLG
Gene Description:calcium voltage-gated channel auxiliary subunit gamma 1
Gene Type:protein-coding
CpG%:0.055
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):