Difference between revisions of "TSS:Hg 79085.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000361082.7:0 ENST00000488266.5:0 ENST00000275635.11:0 uc064eiw.1:0 uc003uah.4:0 uc064eix.1:0 AF161531:0 AF252611:0 AF252612:0 AF252614:0 AK225150...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LAB= | ||
| + | |NTAL= | ||
| + | |WBSCR15= | ||
| + | |WBSCR5= | ||
| + | |WSCR5= | ||
|all_trans=ENST00000361082.7:0 ENST00000488266.5:0 ENST00000275635.11:0 uc064eiw.1:0 uc003uah.4:0 uc064eix.1:0 AF161531:0 AF252611:0 AF252612:0 AF252614:0 AK225150:0 AK290916:0 AK290074:0 AF252613:1 ENST00000470709.1:3 uc064eiy.1:3 ENST00000398475.5:-17 uc064eiv.1:-17 BC006080:-17 AK002099:-31 ENST00000475494.5:-44 uc064eiu.1:-44 BC001609:-53 ENST00000491595.1:-71 uc064eit.1:-71 NM_014146:-241 NM_032463:-241 NM_032464:-241 | |all_trans=ENST00000361082.7:0 ENST00000488266.5:0 ENST00000275635.11:0 uc064eiw.1:0 uc003uah.4:0 uc064eix.1:0 AF161531:0 AF252611:0 AF252612:0 AF252614:0 AK225150:0 AK290916:0 AK290074:0 AF252613:1 ENST00000470709.1:3 uc064eiy.1:3 ENST00000398475.5:-17 uc064eiv.1:-17 BC006080:-17 AK002099:-31 ENST00000475494.5:-44 uc064eiu.1:-44 BC001609:-53 ENST00000491595.1:-71 uc064eit.1:-71 NM_014146:-241 NM_032463:-241 NM_032464:-241 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=252 | |distance_to_tss=252 | ||
|end=74210020 | |end=74210020 | ||
| + | |end_of_center_position=74210009 | ||
|entrez_id=7462 | |entrez_id=7462 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=HSPC046 | + | |gene_alias=HSPC046 |
|gene_description=linker for activation of T-cells family member 2 | |gene_description=linker for activation of T-cells family member 2 | ||
|gene_id=7462 | |gene_id=7462 | ||
| Line 24: | Line 30: | ||
|species=human | |species=human | ||
|start=74209997 | |start=74209997 | ||
| + | |start_of_center_position=74210008 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000361082.7 ENST00000488266.5 ENST00000275635.11 uc064eiw.1 uc003uah.4 uc064eix.1 AF161531 AF252611 AF252612 AF252614 AK225150 AK290916 AK290074 | |transcript_name=ENST00000361082.7 ENST00000488266.5 ENST00000275635.11 uc064eiw.1 uc003uah.4 uc064eix.1 AF161531 AF252611 AF252612 AF252614 AK225150 AK290916 AK290074 | ||
Revision as of 06:14, 15 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74210008 |
|---|---|
| End of the center position in the TSS region: | 74210009 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000361082.7 ENST00000488266.5 ENST00000275635.11 uc064eiw.1 uc003uah.4 uc064eix.1 AF161531 AF252611 AF252612 AF252614 AK225150 AK290916 AK290074 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | ENST00000361082.7:0 ENST00000488266.5:0 ENST00000275635.11:0 uc064eiw.1:0 uc003uah.4:0 uc064eix.1:0 AF161531:0 AF252611:0 AF252612:0 AF252614:0 AK225150:0 AK290916:0 AK290074:0 AF252613:1 ENST00000470709.1:3 uc064eiy.1:3 ENST00000398475.5:-17 uc064eiv.1:-17 BC006080:-17 AK002099:-31 ENST00000475494.5:-44 uc064eiu.1:-44 BC001609:-53 ENST00000491595.1:-71 uc064eit.1:-71 NM_014146:-241 NM_032463:-241 NM_032464:-241 |
TATA-Box annotation
| Distance to TSS: | 252 |
|---|---|
| Nearest PromoterID: | NM_032463 |
| Entrez ID: | 7462 |
| Nearest Unigene: | Hs.741249 |
| Nearest Refseq: | NM_014146 |
| Nearest Ensembl: | ENSG00000086730 |
| Gene Name: | linker for activation of T-cells family member 2 |
| Gene Alias: | HSPC046 |
| Gene Description: | linker for activation of T-cells family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
