Difference between revisions of "TSS:Hg 242058.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=DQ594401:-376 |chr=chr6 |cpg_percent=0.08 |distance=-376 |distance_to_tss=277 |end=26204928 |entrez_id=8367 |gc_percent=0.537313 |gene_alias=H4/j|H4FJ |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |H4FJ= | ||
|all_trans=DQ594401:-376 | |all_trans=DQ594401:-376 | ||
|chr=chr6 | |chr=chr6 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=277 | |distance_to_tss=277 | ||
|end=26204928 | |end=26204928 | ||
| + | |end_of_center_position=102517779 | ||
|entrez_id=8367 | |entrez_id=8367 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=H4/j | + | |gene_alias=H4/j |
|gene_description=histone cluster 1 H4 family member e | |gene_description=histone cluster 1 H4 family member e | ||
|gene_name=HIST1H4E | |gene_name=HIST1H4E | ||
| Line 19: | Line 21: | ||
|species=human | |species=human | ||
|start=26204916 | |start=26204916 | ||
| + | |start_of_center_position=102517778 | ||
|strand=- | |strand=- | ||
|tata_box="-93(GCCCTGAAAAGG,-,0.00)" | |tata_box="-93(GCCCTGAAAAGG,-,0.00)" | ||
Revision as of 08:27, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 102517778 |
|---|---|
| End of the center position in the TSS region: | 102517779 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ594401 |
|---|---|
| Distance: | -376 |
| Num_trans: | 1 |
| All_trans: | DQ594401:-376 |
TATA-Box annotation
| Distance to TSS: | 277 |
|---|---|
| Nearest PromoterID: | NM_003545 |
| Entrez ID: | 8367 |
| Nearest Unigene: | Hs.662174 |
| Nearest Refseq: | NM_003545 |
| Nearest Ensembl: | ENSG00000276966 |
| Gene Name: | HIST1H4E |
| Gene Alias: | H4/j |
| Gene Description: | histone cluster 1 H4 family member e |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-93(GCCCTGAAAAGG,-,0.00)" |
