Difference between revisions of "TSS:Hg 169168.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000401449.5:-81 NM_174886:-81 uc002klu.5:-81 ENST00000547233.1:193 uc060mxx.1:193 ENST00000552383.5:-400 uc060mxw.1:-400 |chr=chr18 |cpg_percent=0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000401449.5:-81 NM_174886:-81 uc002klu.5:-81 ENST00000547233.1:193 uc060mxx.1:193 ENST00000552383.5:-400 uc060mxw.1:-400 | |all_trans=ENST00000401449.5:-81 NM_174886:-81 uc002klu.5:-81 ENST00000547233.1:193 uc060mxx.1:193 ENST00000552383.5:-400 uc060mxw.1:-400 | ||
|chr=chr18 | |chr=chr18 | ||
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|distance_to_tss=82 | |distance_to_tss=82 | ||
|end=3412011 | |end=3412011 | ||
| + | |end_of_center_position=3412010 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3412007 | |start=3412007 | ||
| + | |start_of_center_position=3412009 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000401449.5 NM_174886 uc002klu.5 | |transcript_name=ENST00000401449.5 NM_174886 uc002klu.5 | ||
Revision as of 08:57, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3412009 |
|---|---|
| End of the center position in the TSS region: | 3412010 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000401449.5 NM_174886 uc002klu.5 |
|---|---|
| Distance: | -81 |
| Num_trans: | 7 |
| All_trans: | ENST00000401449.5:-81 NM_174886:-81 uc002klu.5:-81 ENST00000547233.1:193 uc060mxx.1:193 ENST00000552383.5:-400 uc060mxw.1:-400 |
TATA-Box annotation
| Distance to TSS: | 82 |
|---|---|
| Nearest PromoterID: | NM_174886 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
