Difference between revisions of "TSS:Hg 169169.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_173207:42 ENST00000618001.4:65 uc002klv.5:65 AK291112:86 |chr=chr18 |cpg_percent=0.03 |distance=42 |distance_to_tss=-45 |end=3447544 |entrez_id=7050...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=NM_173207:42 ENST00000618001.4:65 uc002klv.5:65 AK291112:86 | |all_trans=NM_173207:42 ENST00000618001.4:65 uc002klv.5:65 AK291112:86 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-45 | |distance_to_tss=-45 | ||
|end=3447544 | |end=3447544 | ||
| + | |end_of_center_position=3447542 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3447538 | |start=3447538 | ||
| + | |start_of_center_position=3447541 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_173207 | |transcript_name=NM_173207 | ||
Revision as of 08:58, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3447541 |
|---|---|
| End of the center position in the TSS region: | 3447542 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_173207 |
|---|---|
| Distance: | 42 |
| Num_trans: | 4 |
| All_trans: | NM_173207:42 ENST00000618001.4:65 uc002klv.5:65 AK291112:86 |
TATA-Box annotation
| Distance to TSS: | -45 |
|---|---|
| Nearest PromoterID: | NM_173207 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
