Difference between revisions of "TSS:Hg 92010.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC117564:81 BC140067:98 BC140068:98 KJ899344:98 AF121259:99 AF293357:-164 BC017740:-174 ENST00000297488.10:-184 uc003wxs.4:-184 BC098381:-184 BC142971:-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ATIP= | ||
| + | |ICIS= | ||
| + | |MP44= | ||
| + | |MTSG1= | ||
|all_trans=BC117564:81 BC140067:98 BC140068:98 KJ899344:98 AF121259:99 AF293357:-164 BC017740:-174 ENST00000297488.10:-184 uc003wxs.4:-184 BC098381:-184 BC142971:-184 AK314692:-184 FJ472827:-185 NM_020749:-251 AK289750:-251 | |all_trans=BC117564:81 BC140067:98 BC140068:98 KJ899344:98 AF121259:99 AF293357:-164 BC017740:-174 ENST00000297488.10:-184 uc003wxs.4:-184 BC098381:-184 BC142971:-184 AK314692:-184 FJ472827:-185 NM_020749:-251 AK289750:-251 | ||
|chr=chr8 | |chr=chr8 | ||
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|distance_to_tss=256 | |distance_to_tss=256 | ||
|end=17697486 | |end=17697486 | ||
| + | |end_of_center_position=17697481 | ||
|entrez_id=57509 | |entrez_id=57509 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=ATBP | + | |gene_alias=ATBP |
|gene_description=microtubule associated tumor suppressor 1 | |gene_description=microtubule associated tumor suppressor 1 | ||
|gene_id=57509 | |gene_id=57509 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=17697475 | |start=17697475 | ||
| + | |start_of_center_position=17697480 | ||
|strand=- | |strand=- | ||
|tata_box="29(GAGTTTAAAAAG,-,0.00),31(GTTTAAAAAGAC,+,0.00)" | |tata_box="29(GAGTTTAAAAAG,-,0.00),31(GTTTAAAAAGAC,+,0.00)" | ||
Revision as of 13:27, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17697480 |
|---|---|
| End of the center position in the TSS region: | 17697481 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC117564 |
|---|---|
| Distance: | 81 |
| Num_trans: | 15 |
| All_trans: | BC117564:81 BC140067:98 BC140068:98 KJ899344:98 AF121259:99 AF293357:-164 BC017740:-174 ENST00000297488.10:-184 uc003wxs.4:-184 BC098381:-184 BC142971:-184 AK314692:-184 FJ472827:-185 NM_020749:-251 AK289750:-251 |
TATA-Box annotation
| Distance to TSS: | 256 |
|---|---|
| Nearest PromoterID: | NM_020749 |
| Entrez ID: | 57509 |
| Nearest Unigene: | Hs.7946 |
| Nearest Refseq: | NM_020749 |
| Nearest Ensembl: | ENSG00000129422 |
| Gene Name: | microtubule associated tumor suppressor 1 |
| Gene Alias: | ATBP |
| Gene Description: | microtubule associated tumor suppressor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "29(GAGTTTAAAAAG,-,0.00),31(GTTTAAAAAGAC,+,0.00)" |
