Difference between revisions of "TSS:Hg 100098.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-206494 |entrez_id=100129385 |gc_percent=0.487562 |gene_alias=Em:AL513424.1 |gene_description=chromosome 9 open reading frame 9...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=NA | ||
|distance_to_tss=-206494 | |distance_to_tss=-206494 | ||
| + | |end=16482809 | ||
| + | |end_of_center_position=16482807 | ||
|entrez_id=100129385 | |entrez_id=100129385 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000205549 | |nearest_ensembl=ENSG00000205549 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364979 |
|nearest_refseq=NM_001271829 | |nearest_refseq=NM_001271829 | ||
|nearest_unigene=Hs.586441 | |nearest_unigene=Hs.586441 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=16482804 | ||
| + | |start_of_center_position=16482806 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100098.1 | |tss_id=hg_100098.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:29, 11 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16482806 |
|---|---|
| End of the center position in the TSS region: | 16482807 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -206494 |
|---|---|
| Nearest PromoterID: | NM_001364979 |
| Entrez ID: | 100129385 |
| Nearest Unigene: | Hs.586441 |
| Nearest Refseq: | NM_001271829 |
| Nearest Ensembl: | ENSG00000205549 |
| Gene Name: | C9orf92 |
| Gene Alias: | Em:AL513424.1 |
| Gene Description: | chromosome 9 open reading frame 92 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
