Difference between revisions of "TSS:Hg 100105.1"
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF355508:-96 MA591085:-96 LF355507:166 MA591084:166 LF355506:325 MA591083:325 LF355505:485 MA591082:485 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-96 |
| − | |distance_to_tss=- | + | |distance_to_tss=-211097 |
|end=16515719 | |end=16515719 | ||
| − | |entrez_id= | + | |end_of_center_position=16515717 |
| + | |entrez_id=111216284 | ||
|gc_percent=0.318408 | |gc_percent=0.318408 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=BNC2 antisense RNA 1 |
| − | |gene_name= | + | |gene_name=BNC2-AS1 |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000234779 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_151723 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_151723 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.609218 |
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=16515714 | |start=16515714 | ||
| + | |start_of_center_position=16515716 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF355508 MA591085 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100105.1 | |tss_id=hg_100105.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:30, 11 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 16515716 |
|---|---|
| End of the center position in the TSS region: | 16515717 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF355508 MA591085 |
|---|---|
| Distance: | -96 |
| Num_trans: | 8 |
| All_trans: | LF355508:-96 MA591085:-96 LF355507:166 MA591084:166 LF355506:325 MA591083:325 LF355505:485 MA591082:485 |
TATA-Box annotation
| Distance to TSS: | -211097 |
|---|---|
| Nearest PromoterID: | NR_151723 |
| Entrez ID: | 111216284 |
| Nearest Unigene: | Hs.609218 |
| Nearest Refseq: | NR_151723 |
| Nearest Ensembl: | ENSG00000234779 |
| Gene Name: | BNC2-AS1 |
| Gene Alias: | - |
| Gene Description: | BNC2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.318408 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
