Difference between revisions of "TSS:Hg 100122.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000418777.5:53 ENST00000468187.6:53 | + | |all_trans=ENST00000418777.5:53 ENST00000468187.6:53 LF355575:67 MA591152:67 ENST00000603713.5:-102 DQ884944:-102 AY438376:139 ENST00000603313.5:-151 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=53 | |distance=53 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1242 |
|end=16728063 | |end=16728063 | ||
|end_of_center_position=16728057 | |end_of_center_position=16728057 | ||
| − | |entrez_id= | + | |entrez_id=111216284 |
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=BNC2 antisense RNA 1 |
|gene_id=54796 | |gene_id=54796 | ||
|gene_name=basonuclin 2 | |gene_name=basonuclin 2 | ||
| Line 16: | Line 16: | ||
|gene_symbol=BNC2 | |gene_symbol=BNC2 | ||
|gene_synonyms=BSN2 FLJ20043 | |gene_synonyms=BSN2 FLJ20043 | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:30988 | |hgnc_mgi_id=HGNC:30988 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000234779 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_151723 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_151723 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.609218 |
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=16728049 | |start=16728049 | ||
|start_of_center_position=16728056 | |start_of_center_position=16728056 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000418777.5 ENST00000468187.6 | + | |transcript_name=ENST00000418777.5 ENST00000468187.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100122.1 | |tss_id=hg_100122.1 | ||
Revision as of 17:30, 11 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16728056 |
|---|---|
| End of the center position in the TSS region: | 16728057 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000418777.5 ENST00000468187.6 |
|---|---|
| Distance: | 53 |
| Num_trans: | 8 |
| All_trans: | ENST00000418777.5:53 ENST00000468187.6:53 LF355575:67 MA591152:67 ENST00000603713.5:-102 DQ884944:-102 AY438376:139 ENST00000603313.5:-151 |
TATA-Box annotation
| Distance to TSS: | 1242 |
|---|---|
| Nearest PromoterID: | NR_151723 |
| Entrez ID: | 111216284 |
| Nearest Unigene: | Hs.609218 |
| Nearest Refseq: | NR_151723 |
| Nearest Ensembl: | ENSG00000234779 |
| Gene Name: | basonuclin 2 |
| Gene Alias: | - |
| Gene Description: | BNC2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
