Difference between revisions of "TSS:Hg 100129.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000486514.5:247 | + | |all_trans=ENST00000486514.5:247 LF206511:325 MA442088:325 ENST00000484726.5:330 AK299073:332 ENST00000545497.5:343 CR933649:343 ENST00000380667.6:359 ENST00000380672.9:420 NM_001317939:420 NM_017637:420 NM_001317940:420 AK131398:420 DQ884938:423 DQ884939:423 DQ884940:423 DQ884941:423 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=247 | |distance=247 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-427 |
|end=16871105 | |end=16871105 | ||
|end_of_center_position=16871098 | |end_of_center_position=16871098 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_017637 | |nearest_refseq=NM_017637 | ||
|nearest_unigene=Hs.656581 | |nearest_unigene=Hs.656581 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=16871089 | |start=16871089 | ||
|start_of_center_position=16871097 | |start_of_center_position=16871097 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000486514.5 | + | |transcript_name=ENST00000486514.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100129.1 | |tss_id=hg_100129.1 | ||
Revision as of 17:30, 11 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16871097 |
|---|---|
| End of the center position in the TSS region: | 16871098 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000486514.5 |
|---|---|
| Distance: | 247 |
| Num_trans: | 17 |
| All_trans: | ENST00000486514.5:247 LF206511:325 MA442088:325 ENST00000484726.5:330 AK299073:332 ENST00000545497.5:343 CR933649:343 ENST00000380667.6:359 ENST00000380672.9:420 NM_001317939:420 NM_017637:420 NM_001317940:420 AK131398:420 DQ884938:423 DQ884939:423 DQ884940:423 DQ884941:423 |
TATA-Box annotation
| Distance to TSS: | -427 |
|---|---|
| Nearest PromoterID: | NM_001317940 |
| Entrez ID: | 54796 |
| Nearest Unigene: | Hs.656581 |
| Nearest Refseq: | NM_017637 |
| Nearest Ensembl: | ENSG00000173068 |
| Gene Name: | basonuclin 2 |
| Gene Alias: | BSN2 |
| Gene Description: | basonuclin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
