Difference between revisions of "TSS:Hg 100145.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|FAM154A= | |FAM154A= | ||
| − | |all_trans=ENST00000380530.1 | + | |all_trans=ENST00000380530.1:0 AK057474:0 ENST00000380534.9:31 ENST00000583128.2:31 NM_001287050:31 NM_153707:31 AK292245:31 BC033489:54 KJ900327:332 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-38 |
|end=19033255 | |end=19033255 | ||
|end_of_center_position=19033248 | |end_of_center_position=19033248 | ||
|entrez_id=158297 | |entrez_id=158297 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=C9orf138 | + | |gene_alias=C9orf138|FAM154A |
|gene_description=stabilizer of axonemal microtubules 1 | |gene_description=stabilizer of axonemal microtubules 1 | ||
|gene_id=158297 | |gene_id=158297 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_153707 | |nearest_refseq=NM_153707 | ||
|nearest_unigene=Hs.731593 | |nearest_unigene=Hs.731593 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=19033239 | |start=19033239 | ||
|start_of_center_position=19033247 | |start_of_center_position=19033247 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000380530.1 | + | |transcript_name=ENST00000380530.1 AK057474 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100145.1 | |tss_id=hg_100145.1 | ||
Revision as of 17:31, 11 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19033247 |
|---|---|
| End of the center position in the TSS region: | 19033248 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380530.1 AK057474 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000380530.1:0 AK057474:0 ENST00000380534.9:31 ENST00000583128.2:31 NM_001287050:31 NM_153707:31 AK292245:31 BC033489:54 KJ900327:332 |
TATA-Box annotation
| Distance to TSS: | -38 |
|---|---|
| Nearest PromoterID: | NM_153707 |
| Entrez ID: | 158297 |
| Nearest Unigene: | Hs.731593 |
| Nearest Refseq: | NM_153707 |
| Nearest Ensembl: | ENSG00000155875 |
| Gene Name: | stabilizer of axonemal microtubules 1 |
| Gene Alias: | C9orf138 |
| Gene Description: | stabilizer of axonemal microtubules 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
