Difference between revisions of "TSS:Hg 100208.1"
From referenceTSS
| Line 12: | Line 12: | ||
|gene_description=interferon omega 1 | |gene_description=interferon omega 1 | ||
|gene_id=3467 | |gene_id=3467 | ||
| − | |gene_name= | + | |gene_name=interferon omega 1 |
|gene_source=HGNC:5448 | |gene_source=HGNC:5448 | ||
|gene_symbol=IFNW1 | |gene_symbol=IFNW1 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=21141637 | |start_of_center_position=21141637 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(TCCTATTAAAAG,-,0.00),-33(CTATTAAAAGCC,+,0.00) |
|transcript_name=BC117290 BC117292 | |transcript_name=BC117290 BC117292 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 14:19, 14 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 21141637 |
|---|---|
| End of the center position in the TSS region: | 21141638 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC117290 BC117292 |
|---|---|
| Distance: | 30 |
| Num_trans: | 9 |
| All_trans: | BC117290:30 BC117292:30 BC069095:63 KJ891441:67 HQ258108:67 AB464596:67 X02669:129 AY780805:136 NM_002177:-262 |
TATA-Box annotation
| Distance to TSS: | 263 |
|---|---|
| Nearest PromoterID: | NM_002177 |
| Entrez ID: | 3467 |
| Nearest Unigene: | Hs.73010 |
| Nearest Refseq: | NM_002177 |
| Nearest Ensembl: | ENSG00000177047 |
| Gene Name: | interferon omega 1 |
| Gene Alias: | - |
| Gene Description: | interferon omega 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(TCCTATTAAAAG,-,0.00),-33(CTATTAAAAGCC,+,0.00) |
