Difference between revisions of "TSS:Hg 100232.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=9269 |
|end=21550529 | |end=21550529 | ||
|end_of_center_position=21550529 | |end_of_center_position=21550529 | ||
|entrez_id=554202 | |entrez_id=554202 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=hsa-lnc-31 | + | |gene_alias=LncHIFCAR|hsa-lnc-31 |
|gene_description=MIR31 host gene | |gene_description=MIR31 host gene | ||
|gene_name=MIR31HG | |gene_name=MIR31HG | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_152877 |
|nearest_refseq=NR_027054 | |nearest_refseq=NR_027054 | ||
|nearest_unigene=Hs.458096 | |nearest_unigene=Hs.458096 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=21550528 | |start_of_center_position=21550528 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=85(GTTTATAGAGTC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 14:20, 14 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21550528 |
|---|---|
| End of the center position in the TSS region: | 21550529 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 9269 |
|---|---|
| Nearest PromoterID: | NR_152877 |
| Entrez ID: | 554202 |
| Nearest Unigene: | Hs.458096 |
| Nearest Refseq: | NR_027054 |
| Nearest Ensembl: | |
| Gene Name: | MIR31HG |
| Gene Alias: | LncHIFCAR |
| Gene Description: | MIR31 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 85(GTTTATAGAGTC,+,0.00) |
