Difference between revisions of "TSS:Hg 100279.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000664493.1:-8 ENST00000640003.1:-37 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-8 |
|distance_to_tss=233750 | |distance_to_tss=233750 | ||
|end=23438663 | |end=23438663 | ||
| Line 12: | Line 13: | ||
|gene_name=LOC101929563 | |gene_name=LOC101929563 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000283982 |
|nearest_promoter_id=NR_121602 | |nearest_promoter_id=NR_121602 | ||
|nearest_refseq=NR_121602 | |nearest_refseq=NR_121602 | ||
|nearest_unigene=Hs.533220 | |nearest_unigene=Hs.533220 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=23438635 | |start=23438635 | ||
|start_of_center_position=23438649 | |start_of_center_position=23438649 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000664493.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100279.1 | |tss_id=hg_100279.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 14:21, 14 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23438649 |
|---|---|
| End of the center position in the TSS region: | 23438650 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000664493.1 |
|---|---|
| Distance: | -8 |
| Num_trans: | 2 |
| All_trans: | ENST00000664493.1:-8 ENST00000640003.1:-37 |
TATA-Box annotation
| Distance to TSS: | 233750 |
|---|---|
| Nearest PromoterID: | NR_121602 |
| Entrez ID: | 101929563 |
| Nearest Unigene: | Hs.533220 |
| Nearest Refseq: | NR_121602 |
| Nearest Ensembl: | ENSG00000283982 |
| Gene Name: | LOC101929563 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101929563 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
