Difference between revisions of "TSS:Hg 100330.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000380055. | + | |all_trans=BC056252:0 ENST00000380055.6:17 NM_022901:17 AK024955:17 AK222987:24 BC126156:37 BC136298:37 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-21 |
|end=27005697 | |end=27005697 | ||
|end_of_center_position=27005693 | |end_of_center_position=27005693 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_022901 | |nearest_refseq=NM_022901 | ||
|nearest_unigene=Hs.128071 | |nearest_unigene=Hs.128071 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=27005688 | |start=27005688 | ||
|start_of_center_position=27005692 | |start_of_center_position=27005692 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC056252 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100330.1 | |tss_id=hg_100330.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 14:23, 14 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 27005692 |
|---|---|
| End of the center position in the TSS region: | 27005693 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC056252 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | BC056252:0 ENST00000380055.6:17 NM_022901:17 AK024955:17 AK222987:24 BC126156:37 BC136298:37 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_022901 |
| Entrez ID: | 64922 |
| Nearest Unigene: | Hs.128071 |
| Nearest Refseq: | NM_022901 |
| Nearest Ensembl: | ENSG00000184434 |
| Gene Name: | leucine rich repeat containing 19 |
| Gene Alias: | - |
| Gene Description: | leucine rich repeat containing 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.293532 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
