Difference between revisions of "TSS:Hg 10035.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000377834.8:0 ENST00000489730.1:0 NM_019089 | + | |all_trans=ENST00000377834.8:0 ENST00000489730.1:0 NM_019089:0 AK091122:0 ENST00000487437.5:2 ENST00000377836.8:6 BC142687:10 BC132698:27 BC136963:27 KJ902672:87 AB463714:88 LF357508:279 MA593085:279 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_019089 | |nearest_refseq=NM_019089 | ||
|nearest_unigene=Hs.118727 | |nearest_unigene=Hs.118727 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=6419908 | |start=6419908 | ||
|start_of_center_position=6419917 | |start_of_center_position=6419917 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(CTCCCTTAAAGC,-,0.00) |
| − | |transcript_name=ENST00000377834.8 ENST00000489730.1 NM_019089 | + | |transcript_name=ENST00000377834.8 ENST00000489730.1 NM_019089 AK091122 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10035.1 | |tss_id=hg_10035.1 | ||
Revision as of 15:17, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6419917 |
|---|---|
| End of the center position in the TSS region: | 6419918 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377834.8 ENST00000489730.1 NM_019089 AK091122 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000377834.8:0 ENST00000489730.1:0 NM_019089:0 AK091122:0 ENST00000487437.5:2 ENST00000377836.8:6 BC142687:10 BC132698:27 BC136963:27 KJ902672:87 AB463714:88 LF357508:279 MA593085:279 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_019089 |
| Entrez ID: | 54626 |
| Nearest Unigene: | Hs.118727 |
| Nearest Refseq: | NM_019089 |
| Nearest Ensembl: | ENSG00000069812 |
| Gene Name: | hes family bHLH transcription factor 2 |
| Gene Alias: | bHLHb40 |
| Gene Description: | hes family bHLH transcription factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTCCCTTAAAGC,-,0.00) |
