Difference between revisions of "TSS:Hg 10041.1"
From referenceTSS
| Line 8: | Line 8: | ||
|WSL-1= | |WSL-1= | ||
|WSL-LR= | |WSL-LR= | ||
| + | |all_trans=ENST00000676255.1:-375 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-375 |
|distance_to_tss=-8909 | |distance_to_tss=-8909 | ||
|end=6475122 | |end=6475122 | ||
| Line 16: | Line 17: | ||
|entrez_id=8718 | |entrez_id=8718 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=APO-3 | + | |gene_alias=APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR |
|gene_description=TNF receptor superfamily member 25 | |gene_description=TNF receptor superfamily member 25 | ||
| − | |gene_name= | + | |gene_id=57449 |
| + | |gene_name=pleckstrin homology and RhoGEF domain containing G5 | ||
| + | |gene_source=HGNC:29105 | ||
| + | |gene_symbol=PLEKHG5 | ||
| + | |gene_synonyms=GEF720 KIAA0720 Syx Tech | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29105 | ||
|nearest_ensembl=ENSG00000215788 | |nearest_ensembl=ENSG00000215788 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_148966 |
|nearest_refseq=NM_003790 | |nearest_refseq=NM_003790 | ||
|nearest_unigene=Hs.462529 | |nearest_unigene=Hs.462529 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=6475085 | |start=6475085 | ||
|start_of_center_position=6475103 | |start_of_center_position=6475103 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000676255.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10041.1 | |tss_id=hg_10041.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 15:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6475103 |
|---|---|
| End of the center position in the TSS region: | 6475104 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000676255.1 |
|---|---|
| Distance: | -375 |
| Num_trans: | 1 |
| All_trans: | ENST00000676255.1:-375 |
TATA-Box annotation
| Distance to TSS: | -8909 |
|---|---|
| Nearest PromoterID: | NM_148966 |
| Entrez ID: | 8718 |
| Nearest Unigene: | Hs.462529 |
| Nearest Refseq: | NM_003790 |
| Nearest Ensembl: | ENSG00000215788 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | APO-3 |
| Gene Description: | TNF receptor superfamily member 25 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
