Difference between revisions of "TSS:Hg 100451.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HAP= | |HAP= | ||
|RAP46= | |RAP46= | ||
| − | |all_trans=ENST00000379707.7:0 ENST00000635077.1:0 BC001936:0 Z35491:0 AF116273:0 AF022224:0 U46917:0 AK222749:0 AK316577:0 | + | |all_trans=ENST00000634734.3:0 ENST00000379707.7:0 ENST00000635077.1:0 NM_004323:0 NM_001172415:0 NM_001349286:0 NM_001349299:0 BC001936:0 Z35491:0 AF116273:0 AF022224:0 U46917:0 AK222749:0 AK316577:0 ENST00000488499.1:9 AK096038:29 ENST00000379704.7:108 BC014774:108 ENST00000473781.1:120 KJ890753:218 AM392568:218 KU177932:218 KU177933:218 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-3 |
|end=33264743 | |end=33264743 | ||
|end_of_center_position=33264711 | |end_of_center_position=33264711 | ||
|entrez_id=573 | |entrez_id=573 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=BAG-1 | + | |gene_alias=BAG-1|HAP|RAP46 |
|gene_description=BCL2 associated athanogene 1 | |gene_description=BCL2 associated athanogene 1 | ||
|gene_id=573 | |gene_id=573 | ||
| − | |gene_name= | + | |gene_name=BAG cochaperone 1 |
|gene_source=HGNC:937 | |gene_source=HGNC:937 | ||
|gene_symbol=BAG1 | |gene_symbol=BAG1 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:937 | |hgnc_mgi_id=HGNC:937 | ||
|nearest_ensembl=ENSG00000107262 | |nearest_ensembl=ENSG00000107262 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001349286 |
|nearest_refseq=NM_004323 | |nearest_refseq=NM_004323 | ||
|nearest_unigene=Hs.377484 | |nearest_unigene=Hs.377484 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=33264678 | |start=33264678 | ||
|start_of_center_position=33264710 | |start_of_center_position=33264710 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000379707.7 ENST00000635077.1 BC001936 Z35491 AF116273 AF022224 U46917 AK222749 AK316577 | + | |transcript_name=ENST00000634734.3 ENST00000379707.7 ENST00000635077.1 NM_004323 NM_001172415 NM_001349286 NM_001349299 BC001936 Z35491 AF116273 AF022224 U46917 AK222749 AK316577 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100451.1 | |tss_id=hg_100451.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=F1LLU6 | + | |uniprot_id=A0A0U1RQD7 F1LLU6 J3QTA2 Q99933 |
}} | }} | ||
Revision as of 15:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33264710 |
|---|---|
| End of the center position in the TSS region: | 33264711 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000634734.3 ENST00000379707.7 ENST00000635077.1 NM_004323 NM_001172415 NM_001349286 NM_001349299 BC001936 Z35491 AF116273 AF022224 U46917 AK222749 AK316577 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000634734.3:0 ENST00000379707.7:0 ENST00000635077.1:0 NM_004323:0 NM_001172415:0 NM_001349286:0 NM_001349299:0 BC001936:0 Z35491:0 AF116273:0 AF022224:0 U46917:0 AK222749:0 AK316577:0 ENST00000488499.1:9 AK096038:29 ENST00000379704.7:108 BC014774:108 ENST00000473781.1:120 KJ890753:218 AM392568:218 KU177932:218 KU177933:218 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001349286 |
| Entrez ID: | 573 |
| Nearest Unigene: | Hs.377484 |
| Nearest Refseq: | NM_004323 |
| Nearest Ensembl: | ENSG00000107262 |
| Gene Name: | BAG cochaperone 1 |
| Gene Alias: | BAG-1 |
| Gene Description: | BCL2 associated athanogene 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
