Difference between revisions of "TSS:Hg 100457.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AQPap= | |AQPap= | ||
|GLYCQTL= | |GLYCQTL= | ||
| − | |all_trans=ENST00000624420.3 | + | |all_trans=ENST00000624420.3:0 AK294028:0 ENST00000624890.3:-23 AK297885:-23 ENST00000377425.8:-35 BC062701:-35 ENST00000537089.5:-41 BC119672:-41 BC119673:-41 AB006190:-46 ENST00000623097.3:-81 ENST00000297988.6:-95 NM_001170:-95 NM_001376193:-95 NM_001376192:-95 NM_001376191:-95 NR_164778:-95 NR_164779:-95 ENST00000624075.3:-113 AK297860:-113 ENST00000625032.1:-172 AK301949:-172 ENST00000623519.1:-179 ENST00000625109.3:-207 ENST00000624005.3:-209 NR_134513:-209 NM_001318156:-209 NM_001318158:-209 NM_001318157:-209 NR_134515:-209 NR_134514:-209 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=107 |
|end=33402473 | |end=33402473 | ||
|end_of_center_position=33402462 | |end_of_center_position=33402462 | ||
|entrez_id=364 | |entrez_id=364 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=AQP7L | + | |gene_alias=AQP7L|AQPap|GLYCQTL |
|gene_description=aquaporin 7 | |gene_description=aquaporin 7 | ||
|gene_id=364 | |gene_id=364 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:640 | |hgnc_mgi_id=HGNC:640 | ||
|nearest_ensembl=ENSG00000165269 | |nearest_ensembl=ENSG00000165269 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001170 |
|nearest_refseq=NM_001170 | |nearest_refseq=NM_001170 | ||
|nearest_unigene=Hs.455323 | |nearest_unigene=Hs.455323 | ||
| − | |num_trans= | + | |num_trans=31 |
|species=human | |species=human | ||
|start=33402449 | |start=33402449 | ||
|start_of_center_position=33402461 | |start_of_center_position=33402461 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000624420.3 | + | |transcript_name=ENST00000624420.3 AK294028 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100457.1 | |tss_id=hg_100457.1 | ||
Revision as of 15:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33402461 |
|---|---|
| End of the center position in the TSS region: | 33402462 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000624420.3 AK294028 |
|---|---|
| Distance: | 0 |
| Num_trans: | 31 |
| All_trans: | ENST00000624420.3:0 AK294028:0 ENST00000624890.3:-23 AK297885:-23 ENST00000377425.8:-35 BC062701:-35 ENST00000537089.5:-41 BC119672:-41 BC119673:-41 AB006190:-46 ENST00000623097.3:-81 ENST00000297988.6:-95 NM_001170:-95 NM_001376193:-95 NM_001376192:-95 NM_001376191:-95 NR_164778:-95 NR_164779:-95 ENST00000624075.3:-113 AK297860:-113 ENST00000625032.1:-172 AK301949:-172 ENST00000623519.1:-179 ENST00000625109.3:-207 ENST00000624005.3:-209 NR_134513:-209 NM_001318156:-209 NM_001318158:-209 NM_001318157:-209 NR_134515:-209 NR_134514:-209 |
TATA-Box annotation
| Distance to TSS: | 107 |
|---|---|
| Nearest PromoterID: | NM_001170 |
| Entrez ID: | 364 |
| Nearest Unigene: | Hs.455323 |
| Nearest Refseq: | NM_001170 |
| Nearest Ensembl: | ENSG00000165269 |
| Gene Name: | aquaporin 7 |
| Gene Alias: | AQP7L |
| Gene Description: | aquaporin 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
