Difference between revisions of "TSS:Hg 10048.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Syx= | |Syx= | ||
|Tech= | |Tech= | ||
| − | |all_trans=ENST00000377728. | + | |all_trans=ENST00000377728.8:-82 NM_020631:-82 ENST00000675093.1:-111 AK024676:-115 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance=- | + | |distance=-82 |
| − | |distance_to_tss= | + | |distance_to_tss=91 |
|end=6491585 | |end=6491585 | ||
|end_of_center_position=6491576 | |end_of_center_position=6491576 | ||
|entrez_id=57449 | |entrez_id=57449 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=CMTRIC | + | |gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech |
|gene_description=pleckstrin homology and RhoGEF domain containing G5 | |gene_description=pleckstrin homology and RhoGEF domain containing G5 | ||
|gene_id=57449 | |gene_id=57449 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=6491575 | |start_of_center_position=6491575 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000377728. | + | |transcript_name=ENST00000377728.8 NM_020631 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10048.1 | |tss_id=hg_10048.1 | ||
Revision as of 15:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6491575 |
|---|---|
| End of the center position in the TSS region: | 6491576 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377728.8 NM_020631 |
|---|---|
| Distance: | -82 |
| Num_trans: | 4 |
| All_trans: | ENST00000377728.8:-82 NM_020631:-82 ENST00000675093.1:-111 AK024676:-115 |
TATA-Box annotation
| Distance to TSS: | 91 |
|---|---|
| Nearest PromoterID: | NM_020631 |
| Entrez ID: | 57449 |
| Nearest Unigene: | Hs.284232 |
| Nearest Refseq: | NM_020631 |
| Nearest Ensembl: | ENSG00000171680 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | CMTRIC |
| Gene Description: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
