Difference between revisions of "TSS:Hg 1005.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000375408.7:0 NM_001319838:0 | + | |all_trans=ENST00000375408.7:0 NM_001319838:0 NM_001328124:0 AK092020:0 AK300264:26 BC111058:334 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=17618317 | |start_of_center_position=17618317 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000375408.7 NM_001319838 | + | |transcript_name=ENST00000375408.7 NM_001319838 NM_001328124 AK092020 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_1005.1 | |tss_id=hg_1005.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5VXI4 | + | |uniprot_id=Q5VXI4 Q9HCE6 |
}} | }} | ||
Revision as of 15:21, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17618317 |
|---|---|
| End of the center position in the TSS region: | 17618318 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375408.7 NM_001319838 NM_001328124 AK092020 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000375408.7:0 NM_001319838:0 NM_001328124:0 AK092020:0 AK300264:26 BC111058:334 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001319838 |
| Entrez ID: | 55160 |
| Nearest Unigene: | Hs.443460 |
| Nearest Refseq: | NM_018125 |
| Nearest Ensembl: | ENSG00000074964 |
| Gene Name: | Rho guanine nucleotide exchange factor 10 like |
| Gene Alias: | GrinchGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 10 like |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
