Difference between revisions of "TSS:Hg 100520.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|UNQ470= | |UNQ470= | ||
| − | |all_trans=ENST00000399775. | + | |all_trans=BC022101:22 ENST00000399775.3:61 NM_198573:61 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance= | + | |distance=22 |
| − | |distance_to_tss=- | + | |distance_to_tss=-76 |
|end=34523081 | |end=34523081 | ||
|end_of_center_position=34523066 | |end_of_center_position=34523066 | ||
|entrez_id=375704 | |entrez_id=375704 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=C9orf165 | + | |gene_alias=C9orf165|UNQ470 |
|gene_description=energy homeostasis associated | |gene_description=energy homeostasis associated | ||
|gene_id=375704 | |gene_id=375704 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_198573 | |nearest_refseq=NM_198573 | ||
|nearest_unigene=Hs.522085 | |nearest_unigene=Hs.522085 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=34523050 | |start=34523050 | ||
|start_of_center_position=34523065 | |start_of_center_position=34523065 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC022101 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100520.1 | |tss_id=hg_100520.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 15:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34523065 |
|---|---|
| End of the center position in the TSS region: | 34523066 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC022101 |
|---|---|
| Distance: | 22 |
| Num_trans: | 3 |
| All_trans: | BC022101:22 ENST00000399775.3:61 NM_198573:61 |
TATA-Box annotation
| Distance to TSS: | -76 |
|---|---|
| Nearest PromoterID: | NM_198573 |
| Entrez ID: | 375704 |
| Nearest Unigene: | Hs.522085 |
| Nearest Refseq: | NM_198573 |
| Nearest Ensembl: | ENSG00000168913 |
| Gene Name: | energy homeostasis associated |
| Gene Alias: | C9orf165 |
| Gene Description: | energy homeostasis associated |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
