Difference between revisions of "TSS:Hg 100524.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000378980. | + | |all_trans=ENST00000378980.8:0 NM_001842:0 NM_147164:0 ENST00000351266.8:11 M73238:11 BC001492:23 ENST00000417345.2:-392 ENST00000610543.4:-409 NM_001207011:-409 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=34589731 | |end=34589731 | ||
|end_of_center_position=34589724 | |end_of_center_position=34589724 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:2170 | |hgnc_mgi_id=HGNC:2170 | ||
|nearest_ensembl=ENSG00000122756 | |nearest_ensembl=ENSG00000122756 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_147164 |
|nearest_refseq=NM_001842 | |nearest_refseq=NM_001842 | ||
|nearest_unigene=Hs.129966 | |nearest_unigene=Hs.129966 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=34589716 | |start=34589716 | ||
|start_of_center_position=34589723 | |start_of_center_position=34589723 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000378980. | + | |transcript_name=ENST00000378980.8 NM_001842 NM_147164 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100524.1 | |tss_id=hg_100524.1 | ||
Revision as of 15:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34589723 |
|---|---|
| End of the center position in the TSS region: | 34589724 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000378980.8 NM_001842 NM_147164 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000378980.8:0 NM_001842:0 NM_147164:0 ENST00000351266.8:11 M73238:11 BC001492:23 ENST00000417345.2:-392 ENST00000610543.4:-409 NM_001207011:-409 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_147164 |
| Entrez ID: | 1271 |
| Nearest Unigene: | Hs.129966 |
| Nearest Refseq: | NM_001842 |
| Nearest Ensembl: | ENSG00000122756 |
| Gene Name: | ciliary neurotrophic factor receptor |
| Gene Alias: | - |
| Gene Description: | ciliary neurotrophic factor receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
