Difference between revisions of "TSS:Hg 100562.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|XRCC9= | |XRCC9= | ||
| − | |all_trans=ENST00000425676.5 | + | |all_trans=ENST00000425676.5:0 AK311348:0 ENST00000462124.1:15 BC000032:22 U70310:26 BC011623:-75 DQ892166:155 DQ895360:155 AB464437:158 KJ891145:159 KR709811:159 KR709812:159 KR709813:159 CU674000:159 BT009813:160 KU178053:160 KU178054:160 KU178055:160 KU178056:160 KU178057:160 AK293427:-187 AK312987:-227 ENST00000378643.8:-228 ENST00000448890.1:-228 NM_004629:-228 AJ007669:-302 KU159422:-333 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 10: | Line 10: | ||
|entrez_id=2189 | |entrez_id=2189 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=FAG | + | |gene_alias=FAG|XRCC9 |
| − | |gene_description= | + | |gene_description=FA complementation group G |
|gene_id=2189 | |gene_id=2189 | ||
| − | |gene_name= | + | |gene_name=FA complementation group G |
|gene_source=HGNC:3588 | |gene_source=HGNC:3588 | ||
|gene_symbol=FANCG | |gene_symbol=FANCG | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004629 | |nearest_refseq=NM_004629 | ||
|nearest_unigene=Hs.591084 | |nearest_unigene=Hs.591084 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=human | |species=human | ||
|start=35079683 | |start=35079683 | ||
|start_of_center_position=35079698 | |start_of_center_position=35079698 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000425676.5 | + | |transcript_name=ENST00000425676.5 AK311348 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100562.1 | |tss_id=hg_100562.1 | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35079698 |
|---|---|
| End of the center position in the TSS region: | 35079699 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000425676.5 AK311348 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000425676.5:0 AK311348:0 ENST00000462124.1:15 BC000032:22 U70310:26 BC011623:-75 DQ892166:155 DQ895360:155 AB464437:158 KJ891145:159 KR709811:159 KR709812:159 KR709813:159 CU674000:159 BT009813:160 KU178053:160 KU178054:160 KU178055:160 KU178056:160 KU178057:160 AK293427:-187 AK312987:-227 ENST00000378643.8:-228 ENST00000448890.1:-228 NM_004629:-228 AJ007669:-302 KU159422:-333 |
TATA-Box annotation
| Distance to TSS: | 317 |
|---|---|
| Nearest PromoterID: | NM_004629 |
| Entrez ID: | 2189 |
| Nearest Unigene: | Hs.591084 |
| Nearest Refseq: | NM_004629 |
| Nearest Ensembl: | ENSG00000221829 |
| Gene Name: | FA complementation group G |
| Gene Alias: | FAG |
| Gene Description: | FA complementation group G |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
