Difference between revisions of "TSS:Hg 10057.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NET6= | |NET6= | ||
| − | |all_trans= | + | |all_trans=LF383933:164 MA619510:164 BC105095:164 BC112278:164 BC143646:164 AK091284:227 AK289653:232 ENST00000377705.6:249 NM_024654:249 BC110849:255 HQ258631:259 KJ899555:259 KJ901072:259 ENST00000464665.1:262 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=164 | |distance=164 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-259 |
|end=6554782 | |end=6554782 | ||
|end_of_center_position=6554772 | |end_of_center_position=6554772 | ||
|entrez_id=79707 | |entrez_id=79707 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=Grc3 | + | |gene_alias=Grc3|NET6 |
|gene_description=nucleolar protein 9 | |gene_description=nucleolar protein 9 | ||
|gene_id=79707 | |gene_id=79707 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=6554771 | |start_of_center_position=6554771 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF383933 MA619510 BC105095 BC112278 BC143646 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10057.1 | |tss_id=hg_10057.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6554771 |
|---|---|
| End of the center position in the TSS region: | 6554772 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF383933 MA619510 BC105095 BC112278 BC143646 |
|---|---|
| Distance: | 164 |
| Num_trans: | 14 |
| All_trans: | LF383933:164 MA619510:164 BC105095:164 BC112278:164 BC143646:164 AK091284:227 AK289653:232 ENST00000377705.6:249 NM_024654:249 BC110849:255 HQ258631:259 KJ899555:259 KJ901072:259 ENST00000464665.1:262 |
TATA-Box annotation
| Distance to TSS: | -259 |
|---|---|
| Nearest PromoterID: | NM_024654 |
| Entrez ID: | 79707 |
| Nearest Unigene: | Hs.59425 |
| Nearest Refseq: | NM_024654 |
| Nearest Ensembl: | ENSG00000162408 |
| Gene Name: | nucleolar protein 9 |
| Gene Alias: | Grc3 |
| Gene Description: | nucleolar protein 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
