Difference between revisions of "TSS:Hg 100573.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000378561.5 | + | |all_trans=ENST00000378561.5:-10 AB040972:-10 ENST00000603301.5:-24 NM_001317991:91 ENST00000378557.1:120 AL583909:169 LF354330:226 MA589907:226 LF354329:467 MA589906:467 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-10 | |distance=-10 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-101 |
|end=35111564 | |end=35111564 | ||
|end_of_center_position=35111554 | |end_of_center_position=35111554 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_025182 | |nearest_refseq=NM_025182 | ||
|nearest_unigene=Hs.301696 | |nearest_unigene=Hs.301696 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=35111542 | |start=35111542 | ||
|start_of_center_position=35111553 | |start_of_center_position=35111553 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000378561.5 | + | |transcript_name=ENST00000378561.5 AB040972 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100573.1 | |tss_id=hg_100573.1 | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35111553 |
|---|---|
| End of the center position in the TSS region: | 35111554 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378561.5 AB040972 |
|---|---|
| Distance: | -10 |
| Num_trans: | 10 |
| All_trans: | ENST00000378561.5:-10 AB040972:-10 ENST00000603301.5:-24 NM_001317991:91 ENST00000378557.1:120 AL583909:169 LF354330:226 MA589907:226 LF354329:467 MA589906:467 |
TATA-Box annotation
| Distance to TSS: | -101 |
|---|---|
| Nearest PromoterID: | NM_001317991 |
| Entrez ID: | 80256 |
| Nearest Unigene: | Hs.301696 |
| Nearest Refseq: | NM_025182 |
| Nearest Ensembl: | ENSG00000005238 |
| Gene Name: | family with sequence similarity 214 member B |
| Gene Alias: | KIAA1539 |
| Gene Description: | family with sequence similarity 214 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
