Difference between revisions of "TSS:Hg 100575.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000603301.5 | + | |all_trans=ENST00000603301.5:17 ENST00000378561.5:31 AB040972:31 NM_001317991:153 ENST00000378557.1:182 AL583909:231 LF354330:288 MA589907:288 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=17 | |distance=17 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-158 |
|end=35111615 | |end=35111615 | ||
|end_of_center_position=35111610 | |end_of_center_position=35111610 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_025182 | |nearest_refseq=NM_025182 | ||
|nearest_unigene=Hs.301696 | |nearest_unigene=Hs.301696 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=35111604 | |start=35111604 | ||
|start_of_center_position=35111609 | |start_of_center_position=35111609 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000603301.5 | + | |transcript_name=ENST00000603301.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100575.1 | |tss_id=hg_100575.1 | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35111609 |
|---|---|
| End of the center position in the TSS region: | 35111610 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000603301.5 |
|---|---|
| Distance: | 17 |
| Num_trans: | 8 |
| All_trans: | ENST00000603301.5:17 ENST00000378561.5:31 AB040972:31 NM_001317991:153 ENST00000378557.1:182 AL583909:231 LF354330:288 MA589907:288 |
TATA-Box annotation
| Distance to TSS: | -158 |
|---|---|
| Nearest PromoterID: | NM_001317991 |
| Entrez ID: | 80256 |
| Nearest Unigene: | Hs.301696 |
| Nearest Refseq: | NM_025182 |
| Nearest Ensembl: | ENSG00000005238 |
| Gene Name: | family with sequence similarity 214 member B |
| Gene Alias: | KIAA1539 |
| Gene Description: | family with sequence similarity 214 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
